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Commit 2903d4d1 authored by Schiffer, Christian's avatar Schiffer, Christian
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Changed atlas to galaxy

parent 9dc693d9
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atlas_server/src/static/training/predict.job.sh
+ 2
− 5
View file @ 2903d4d1
...@@ -5,13 +5,10 @@ module purge ...@@ -5,13 +5,10 @@ module purge
export SOFTWARE_STAGE=2022 export SOFTWARE_STAGE=2022
export OTHERSTAGES=/p/software/jurecadc/otherstages export OTHERSTAGES=/p/software/jurecadc/otherstages
export SOFTWARE_DIR=/p/project/cjinm16/schiffer1/software source ${HOME}/galaxy/init.sh
export SOFTWARE_STAGES_DIR=${SOFTWARE_DIR}/stages/
export SOFTWARE_STAGE_DIR=${SOFTWARE_STAGES_DIR}/${SOFTWARE_STAGE}
export SOFTWARE_STAGE_MODULES=${SOFTWARE_STAGE_DIR}/modules/
export ATLAS_MODULE=atlas export ATLAS_MODULE=atlas
module use $OTHERSTAGES &> /dev/null module use ${OTHERSTAGES} &> /dev/null
module use ${SOFTWARE_STAGE_MODULES} &> /dev/null module use ${SOFTWARE_STAGE_MODULES} &> /dev/null
module load ${ATLAS_MODULE} module load ${ATLAS_MODULE}
......
atlas_server/src/static/training/train.job.sh
+ 2
− 5
View file @ 2903d4d1
...@@ -5,13 +5,10 @@ module purge ...@@ -5,13 +5,10 @@ module purge
export SOFTWARE_STAGE=2022 export SOFTWARE_STAGE=2022
export OTHERSTAGES=/p/software/jurecadc/otherstages export OTHERSTAGES=/p/software/jurecadc/otherstages
export SOFTWARE_DIR=/p/project/cjinm16/schiffer1/software source ${HOME}/galaxy/init.sh
export SOFTWARE_STAGES_DIR=${SOFTWARE_DIR}/stages/
export SOFTWARE_STAGE_DIR=${SOFTWARE_STAGES_DIR}/${SOFTWARE_STAGE}
export SOFTWARE_STAGE_MODULES=${SOFTWARE_STAGE_DIR}/modules/
export ATLAS_MODULE=atlas export ATLAS_MODULE=atlas
module use $OTHERSTAGES &> /dev/null module use ${OTHERSTAGES} &> /dev/null
module use ${SOFTWARE_STAGE_MODULES} &> /dev/null module use ${SOFTWARE_STAGE_MODULES} &> /dev/null
module load ${ATLAS_MODULE} module load ${ATLAS_MODULE}
......
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