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Commit 74da4edb authored by Dickscheid, Timo's avatar Dickscheid, Timo
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update volume of interest spec for siibra v0.4a13

parent f0c5039f
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{
"@type": "siibra/feature/voi/v0.0.1",
"@type": "siibra/feature/voi/v0.1",
"modality": "3D Polarized light imaging (3D-PLI)",
"name": "Fiber structures of a human hippocampus based on joint DMRI, 3D-PLI, and TPFM acquisitions",
"ebrains": {
"minds/core/dataset/v1.0.0": "b08a7dbc-7c75-4ce7-905b-690b2b1e8957"
......@@ -7,64 +8,36 @@
"space": {
"@id": "minds/core/referencespace/v1.0.0/a1655b99-82f1-420f-a3c2-fe80fd4c8588"
},
"volumeSrc": [
"volumes": [
{
"name": "PLI HSV-encoded fiber orientation map",
"@type": "siibra/volume/v0.0.1",
"urls": {
"neuroglancer/precomputed": "https://neuroglancer.humanbrainproject.eu/precomputed/data-repo/HSV-FOM"
},
"detail": {
"neuroglancer/precomputed": {
"shader": "void main(){ float r = toNormalized(getDataValue(0)); float g = toNormalized(getDataValue(1)); float b = toNormalized(getDataValue(2)); if (r < 0.1) emitTransparent(); else emitRGB(vec3(r, g, b)); }",
"opacity": 1
}
}
},
{
"@type": "siibra/volume/v0.0.1",
"urls": {
"neuroglancer/precomputed": "https://neuroglancer.humanbrainproject.eu/precomputed/PLI_FOM/BI"
},
"detail": {
"neuroglancer/precomputed": {
"shader": "void main(){ float x = toNormalized(getDataValue()); if (x < 0.1) { emitTransparent(); } else { emitRGB(vec3(0.8 * x, x * 1., 0.8 * x )); } }",
"opacity": 1
}
}
},
{
"@type": "siibra/volume/v0.0.1",
"urls": {
"neuroglancer/precomputed": "https://neuroglancer.humanbrainproject.eu/precomputed/PLI_FOM/BI-TIM"
},
"detail": {
"neuroglancer/precomputed": {
"shader": "void main(){ float x = toNormalized(getDataValue()); if (x > 0.9) { emitTransparent(); } else { emitRGB(vec3(x * 1., x * 0.8, x * 0.8 )); } }",
"opacity": 1
}
}
},
{
"@type": "siibra/volume/v0.0.1",
"urls": {
"neuroglancer/precomputed": "https://neuroglancer.humanbrainproject.eu/precomputed/PLI_FOM/BI-MRI"
},
"detail": {
"neuroglancer/precomputed": {
"shader": "void main(){ float x = toNormalized(getDataValue()); if (x < 0.1) { emitTransparent(); } else { emitRGB(vec3(0.8 * x, 0.8 * x, x * 1. )); } }",
"opacity": 1
}
}
},
{
"@type": "siibra/volume/v0.0.1",
"urls": {
"neuroglancer/precomputed": "https://neuroglancer.humanbrainproject.eu/precomputed/PLI_FOM/BI-MRS"
},
"detail": {
"neuroglancer/precomputed": {
"opacity": 1
}
}
}
]
......
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