repair: initialize shared_ptr

Device/Detector/IDetector2D.cpp

@@ -34,7 +34,7 @@ inline size_t ycoord(size_t index, size_t sizeY)
 
 } // namespace
 
-IDetector2D::IDetector2D() = default;
+IDetector2D::IDetector2D() : m_detector_mask(new DetectorMask) {}
 
 IDetector2D::IDetector2D(const IDetector2D& other)
     : IDetector(other), m_detector_mask(other.m_detector_mask)

auto/Wrap/doxygenResample.i

@@ -37,6 +37,104 @@ C++ includes: DecouplingApproximationStrategy.h
 ";
 
 
+// File: classDiffuseElement.xml
+%feature("docstring") DiffuseElement "
+
+Data stucture containing both input and output of a single detector cell.
+
+C++ includes: DiffuseElement.h
+";
+
+%feature("docstring")  DiffuseElement::DiffuseElement "DiffuseElement::DiffuseElement(double wavelength, double alpha_i, double phi_i, std::unique_ptr< IPixel > pixel, const Eigen::Matrix2cd &beam_polpair, const Eigen::Matrix2cd &analyzer, bool isSpecular_, const Fluxes *const fluxes_in=nullptr, const Fluxes *const fluxes_out=nullptr)
+";
+
+%feature("docstring")  DiffuseElement::DiffuseElement "DiffuseElement::DiffuseElement(const DiffuseElement &)=delete
+";
+
+%feature("docstring")  DiffuseElement::DiffuseElement "DiffuseElement::DiffuseElement(DiffuseElement &&)
+";
+
+%feature("docstring")  DiffuseElement::~DiffuseElement "DiffuseElement::~DiffuseElement()
+";
+
+%feature("docstring")  DiffuseElement::setFluxes "void DiffuseElement::setFluxes(const Fluxes *fluxes_in, const Fluxes *fluxes_out)
+";
+
+%feature("docstring")  DiffuseElement::fluxIn "const IFlux * DiffuseElement::fluxIn(size_t i_layer) const
+";
+
+%feature("docstring")  DiffuseElement::fluxOut "const IFlux * DiffuseElement::fluxOut(size_t i_layer) const
+";
+
+%feature("docstring")  DiffuseElement::pointElement "DiffuseElement DiffuseElement::pointElement(double x, double y) const
+
+Returns copy of this  DiffuseElement with k_f given by in-pixel coordinate x,y. 
+";
+
+%feature("docstring")  DiffuseElement::polarizationHandler "const PolarizerPair& DiffuseElement::polarizationHandler() const
+
+Returns assigned PolarizerPair. 
+";
+
+%feature("docstring")  DiffuseElement::wavelength "double DiffuseElement::wavelength() const
+";
+
+%feature("docstring")  DiffuseElement::getAlphaI "double DiffuseElement::getAlphaI() const
+";
+
+%feature("docstring")  DiffuseElement::getPhiI "double DiffuseElement::getPhiI() const
+";
+
+%feature("docstring")  DiffuseElement::getAlphaMean "double DiffuseElement::getAlphaMean() const
+";
+
+%feature("docstring")  DiffuseElement::getPhiMean "double DiffuseElement::getPhiMean() const
+";
+
+%feature("docstring")  DiffuseElement::setIntensity "void DiffuseElement::setIntensity(double intensity)
+";
+
+%feature("docstring")  DiffuseElement::addIntensity "void DiffuseElement::addIntensity(double intensity)
+";
+
+%feature("docstring")  DiffuseElement::intensity "double DiffuseElement::intensity() const
+";
+
+%feature("docstring")  DiffuseElement::getKi "kvector_t DiffuseElement::getKi() const
+";
+
+%feature("docstring")  DiffuseElement::getMeanKf "kvector_t DiffuseElement::getMeanKf() const
+";
+
+%feature("docstring")  DiffuseElement::meanQ "kvector_t DiffuseElement::meanQ() const
+";
+
+%feature("docstring")  DiffuseElement::getQ "kvector_t DiffuseElement::getQ(double x, double y) const
+
+Returns scattering vector Q, with Kf determined from in-pixel coordinates x,y. In-pixel coordinates take values from 0 to 1. 
+";
+
+%feature("docstring")  DiffuseElement::integrationFactor "double DiffuseElement::integrationFactor(double x, double y) const
+";
+
+%feature("docstring")  DiffuseElement::solidAngle "double DiffuseElement::solidAngle() const
+";
+
+%feature("docstring")  DiffuseElement::getAlpha "double DiffuseElement::getAlpha(double x, double y) const
+";
+
+%feature("docstring")  DiffuseElement::getPhi "double DiffuseElement::getPhi(double x, double y) const
+";
+
+%feature("docstring")  DiffuseElement::wavevectorInfo "WavevectorInfo DiffuseElement::wavevectorInfo() const
+";
+
+%feature("docstring")  DiffuseElement::isSpecular "bool DiffuseElement::isSpecular() const
+
+Tells if simulation element corresponds to a specular peak. 
+";
+
+
 // File: classDWBA__Pol.xml
 %feature("docstring") DWBA_Pol "
 
@@ -596,6 +694,51 @@ Adds n times the same slice to the stack.
 ";
 
 
+// File: classSpecularElement.xml
+%feature("docstring") SpecularElement "
+
+Data stucture containing both input and output of a single image pixel for specular simulation.
+
+C++ includes: SpecularElement.h
+";
+
+%feature("docstring")  SpecularElement::SpecularElement "SpecularElement::SpecularElement(double kz, const PolarizerPair &polpair, bool computable)
+";
+
+%feature("docstring")  SpecularElement::SpecularElement "SpecularElement::SpecularElement(double wavelength, double alpha, const PolarizerPair &polpair, bool computable)
+";
+
+%feature("docstring")  SpecularElement::SpecularElement "SpecularElement::SpecularElement(const SpecularElement &other)=delete
+";
+
+%feature("docstring")  SpecularElement::SpecularElement "SpecularElement::SpecularElement(SpecularElement &&other)
+";
+
+%feature("docstring")  SpecularElement::~SpecularElement "SpecularElement::~SpecularElement()
+";
+
+%feature("docstring")  SpecularElement::polarizationHandler "const PolarizerPair& SpecularElement::polarizationHandler() const
+
+Returns assigned PolarizerPair. 
+";
+
+%feature("docstring")  SpecularElement::intensity "double SpecularElement::intensity() const
+";
+
+%feature("docstring")  SpecularElement::setIntensity "void SpecularElement::setIntensity(double intensity)
+";
+
+%feature("docstring")  SpecularElement::isCalculated "bool SpecularElement::isCalculated() const
+
+Returns calculation flag (if it's false, zero intensity is assigned to the element) 
+";
+
+%feature("docstring")  SpecularElement::produceKz "std::vector< complex_t > SpecularElement::produceKz(const SliceStack &slices)
+
+Returns kz values for Abeles computation of reflection/transition coefficients. 
+";
+
+
 // File: classSSCAStrategy.xml
 %feature("docstring") SSCAStrategy "
 
@@ -608,7 +751,7 @@ C++ includes: SSCAStrategy.h
 ";
 
 
-// File: namespace_0d17.xml
+// File: namespace_0d13.xml
 
 
 // File: namespace_0d2.xml
@@ -617,9 +760,6 @@ C++ includes: SSCAStrategy.h
 // File: namespace_0d21.xml
 
 
-// File: namespace_0d23.xml
-
-
 // File: namespace_0d25.xml
 
 
@@ -629,10 +769,10 @@ C++ includes: SSCAStrategy.h
 // File: namespace_0d29.xml
 
 
-// File: namespace_0d35.xml
+// File: namespace_0d31.xml
 
 
-// File: namespace_0d37.xml
+// File: namespace_0d33.xml
 
 
 // File: namespace_0d39.xml
@@ -641,7 +781,10 @@ C++ includes: SSCAStrategy.h
 // File: namespace_0d41.xml
 
 
-// File: namespace_0d9.xml
+// File: namespace_0d43.xml
+
+
+// File: namespace_0d45.xml
 
 
 // File: namespaceCompute.xml
@@ -754,6 +897,18 @@ Get default z limits for generating a material profile.
 // File: IDWBA_8h.xml
 
 
+// File: DiffuseElement_8cpp.xml
+
+
+// File: DiffuseElement_8h.xml
+
+
+// File: SpecularElement_8cpp.xml
+
+
+// File: SpecularElement_8h.xml
+
+
 // File: IFlux_8h.xml
 
 
@@ -871,6 +1026,9 @@ Get default z limits for generating a material profile.
 // File: dir_b80c39a6072510d81953e3a3f9526614.xml
 
 
+// File: dir_28bc1277e419364b011e46aeb2e8e251.xml
+
+
 // File: dir_4ab1bbd9e8de6a7ddc078bbf4801b604.xml