Making PreRelease

CHANGELOG

+BornAgain-0.9.5, released 2014.04.11
+  > Summary: Refactoring in user API, working on GUI toward first beta.
+  * Bug #605: Fitting examples under Windows doesn't update graphics in realtime
+  * Feature #595: Implement saving of general GUI settings
+  * Feature #596: Investigate serialization of QStandardItemModel
+  * Feature #608: Basic QStandardItemModel structure
+  * Feature #609: Generate domain objects from GUI model objects
+  * Feature #611: Attach drag&drop view to the underlying QStandardItemModel
+  * Feature #612: Attach Property Editor View to the underlying QStandardItemModel
+  * Feature #615: Implement add/remove/move in TreeView
+  * Feature #616: Implement new FormFactor pictograms in widgetbox
+  * Feature #623: Implement basics of JobQueueItem and JobQueueModel
+  * Feature #624: Implement JobQueueView with tree representation of queue's properties and corresponding OutputData widget
+  * Feature #625: Implement basic logic for add/remove/cancel/unddo for JobQueueView
+  * Feature #626: Implement ProgressBar in Coregui and JobQueueModel
+  * Feature #627: Implement serialization of JobQueueModel
+  * Feature #628: Implement call back from Simulation to the ProgressBar of JobQueueView
+  * Feature #641: Drag items to root in treeview
+  * Feature #642: Implement normalization of IntensityData in Python
+  * Feature #645: Implement formfactory property as combobox in property editor
+  * Documentation #584: Write small explanation about core shell form factor in FormFactor's Appendix
+  * Documentation #589: Reduce size in Mb of user manual
+  * Documentation #590: Write Appendix section about interference functions available
+  * Documentation #591: Write Doxygen section about interference functions available
+  * Refactoring #266: Refactor MaterialManager
+  * Refactoring #594: Revise ParticleDecoration appearance/naming in UserAPI
+
 BornAgain-0.9.4, released 2014.02.07
   > Summary: Off specular simulation, beam divergence, support for MacOS Maverick, new form factors
   * Bug #220: Gui: provide GUI compilation under Qt5/linux

CMakeLists.txt

@@ -9,7 +9,7 @@ project(BornAgain)
 # --- The version number ---
 set(BornAgain_VERSION_MAJOR 0)
 set(BornAgain_VERSION_MINOR 9)
-set(BornAgain_VERSION_PATCH 4)
+set(BornAgain_VERSION_PATCH 5)
 
 # --- General project settings ---
 option(BORNAGAIN_PYTHON "Build with python support" ON)

Core/PythonAPI/src/PythonModule.cpp

@@ -4,122 +4,122 @@
 #include "numpy/arrayobject.h"
 // the order of 3 guys above is important
 
-#include "ParticleBuilder.pypp.h" 
-#include "FormFactorFullSpheroid.pypp.h" 
-#include "DistributionGate.pypp.h" 
-#include "SimpleSelectionRule.pypp.h" 
-#include "RealParameterWrapper.pypp.h" 
-#include "vdouble1d_t.pypp.h" 
-#include "SimulationParameters.pypp.h" 
-#include "Transform3D.pypp.h" 
-#include "ThreadInfo.pypp.h" 
-#include "InterferenceFunction2DLattice.pypp.h" 
-#include "LayerInterface.pypp.h" 
-#include "ILayout.pypp.h" 
-#include "FormFactorCone6.pypp.h" 
-#include "FormFactorTetrahedron.pypp.h" 
-#include "FormFactorWeighted.pypp.h" 
+#include "IFTDistribution2D.pypp.h" 
+#include "IntensityDataHelper.pypp.h" 
+#include "Detector.pypp.h" 
+#include "FormFactorRipple2.pypp.h" 
 #include "DistributionGaussian.pypp.h" 
-#include "IDetectorResolution.pypp.h" 
+#include "LatticeBasis.pypp.h" 
+#include "ParticleCoreShell.pypp.h" 
+#include "Beam.pypp.h" 
+#include "ParticleLayout.pypp.h" 
+#include "Lattice.pypp.h" 
 #include "FormFactorCylinder.pypp.h" 
-#include "Crystal.pypp.h" 
-#include "FTDistribution1DCauchy.pypp.h" 
-#include "IFormFactorBorn.pypp.h" 
-#include "FormFactorEllipsoidalCylinder.pypp.h" 
-#include "InterferenceFunctionNone.pypp.h" 
-#include "vector_kvector_t.pypp.h" 
+#include "ICloneable.pypp.h" 
 #include "FormFactorTruncatedSpheroid.pypp.h" 
-#include "Particle.pypp.h" 
-#include "FTDistribution2DCauchy.pypp.h" 
-#include "FormFactorCrystal.pypp.h" 
-#include "vector_longinteger_t.pypp.h" 
-#include "FTDistribution1DGauss.pypp.h" 
-#include "FormFactorAnisoPyramid.pypp.h" 
-#include "MultiLayer.pypp.h" 
+#include "StochasticSampledParameter.pypp.h" 
+#include "HomogeneousMaterial.pypp.h" 
+#include "FormFactorCone6.pypp.h" 
+#include "vector_integer_t.pypp.h" 
+#include "AxisDouble.pypp.h" 
+#include "FormFactorInfLongRipple2.pypp.h" 
+#include "IAxis.pypp.h" 
+#include "FormFactorTetrahedron.pypp.h" 
+#include "InterferenceFunction1DLattice.pypp.h" 
+#include "Layer.pypp.h" 
+#include "ThreadInfo.pypp.h" 
 #include "IFormFactor.pypp.h" 
-#include "kvector_t.pypp.h" 
-#include "FormFactorSphereUniformRadius.pypp.h" 
-#include "OffSpecSimulation.pypp.h" 
-#include "FormFactorRipple1.pypp.h" 
-#include "InterferenceFunction1DParaCrystal.pypp.h" 
-#include "Simulation.pypp.h" 
 #include "IObservable.pypp.h" 
-#include "FormFactorLorentz.pypp.h" 
-#include "ISelectionRule.pypp.h" 
-#include "FormFactorRipple2.pypp.h" 
-#include "StochasticDoubleGate.pypp.h" 
-#include "LayerRoughness.pypp.h" 
-#include "Bin1DCVector.pypp.h" 
-#include "FormFactorSphereGaussianRadius.pypp.h" 
-#include "ParameterPool.pypp.h" 
-#include "FormFactorPrism3.pypp.h" 
-#include "StochasticDoubleGaussian.pypp.h" 
-#include "IMaterial.pypp.h" 
-#include "FTDistribution1DVoigt.pypp.h" 
+#include "RealParameterWrapper.pypp.h" 
+#include "FormFactorInfLongBox.pypp.h" 
 #include "ResolutionFunction2DSimple.pypp.h" 
-#include "AxisDouble.pypp.h" 
+#include "SimulationParameters.pypp.h" 
+#include "FormFactorSphereUniformRadius.pypp.h" 
+#include "AxisBin.pypp.h" 
+#include "FormFactorGauss.pypp.h" 
+#include "FormFactorFullSpheroid.pypp.h" 
+#include "FormFactorAnisoPyramid.pypp.h" 
+#include "PythonInterface_global_variables.pypp.h" 
+#include "ISampleBuilder.pypp.h" 
+#include "StochasticParameter_t.pypp.h" 
+#include "StochasticDoubleGaussian.pypp.h" 
 #include "FormFactorPrism6.pypp.h" 
-#include "IClusteredParticles.pypp.h" 
-#include "DistributionCosine.pypp.h" 
-#include "FormFactorHemiEllipsoid.pypp.h" 
-#include "IAxis.pypp.h" 
-#include "vector_integer_t.pypp.h" 
-#include "Layer.pypp.h" 
+#include "InterferenceFunction2DLattice.pypp.h" 
 #include "FormFactorPyramid.pypp.h" 
-#include "StochasticSampledParameter.pypp.h" 
-#include "IFTDistribution1D.pypp.h" 
+#include "FormFactorBox.pypp.h" 
+#include "DistributionCosine.pypp.h" 
+#include "IResolutionFunction2D.pypp.h" 
+#include "IFormFactorBorn.pypp.h" 
+#include "MultiLayer.pypp.h" 
 #include "DistributionLorentz.pypp.h" 
+#include "FTDistribution2DCauchy.pypp.h" 
+#include "FTDistribution2DVoigt.pypp.h" 
+#include "ICompositeSample.pypp.h" 
+#include "cvector_t.pypp.h" 
+#include "ParameterPool.pypp.h" 
+#include "Particle.pypp.h" 
+#include "FormFactorCone.pypp.h" 
+#include "FormFactorPrism3.pypp.h" 
+#include "InterferenceFunction2DParaCrystal.pypp.h" 
+#include "vdouble1d_t.pypp.h" 
+#include "FormFactorEllipsoidalCylinder.pypp.h" 
+#include "MesoCrystal.pypp.h" 
+#include "FormFactorDecoratorDebyeWaller.pypp.h" 
+#include "vector_IFormFactorPtr_t.pypp.h" 
+#include "ILayout.pypp.h" 
+#include "IMaterial.pypp.h" 
+#include "IFormFactorDecorator.pypp.h" 
+#include "Instrument.pypp.h" 
+#include "IDetectorResolution.pypp.h" 
+#include "FormFactorHemiEllipsoid.pypp.h" 
 #include "IDistribution1D.pypp.h" 
-#include "PositionParticleInfo.pypp.h" 
+#include "ISelectionRule.pypp.h" 
 #include "HomogeneousMagneticMaterial.pypp.h" 
-#include "FormFactorCuboctahedron.pypp.h" 
-#include "cvector_t.pypp.h" 
-#include "OutputDataIOFactory.pypp.h" 
-#include "PythonInterface_free_functions.pypp.h" 
-#include "FormFactorSphereLogNormalRadius.pypp.h" 
+#include "Bin1D.pypp.h" 
+#include "ParticleInfo.pypp.h" 
+#include "vector_longinteger_t.pypp.h" 
+#include "DistributionLogNormal.pypp.h" 
 #include "FormFactorInfLongRipple1.pypp.h" 
-#include "IResolutionFunction2D.pypp.h" 
-#include "vector_IFormFactorPtr_t.pypp.h" 
+#include "LayerInterface.pypp.h" 
 #include "FormFactorFullSphere.pypp.h" 
-#include "ParticleLayout.pypp.h" 
-#include "StochasticParameter_t.pypp.h" 
-#include "FormFactorBox.pypp.h" 
+#include "Transform3D.pypp.h" 
+#include "OffSpecSimulation.pypp.h" 
+#include "FTDistribution2DGauss.pypp.h" 
+#include "FormFactorRipple1.pypp.h" 
+#include "PositionParticleInfo.pypp.h" 
+#include "LayerRoughness.pypp.h" 
+#include "FormFactorCrystal.pypp.h" 
+#include "FormFactorSphereLogNormalRadius.pypp.h" 
+#include "IntensityData.pypp.h" 
+#include "FormFactorTruncatedSphere.pypp.h" 
 #include "IParameterized.pypp.h" 
-#include "Lattice2DIFParameters.pypp.h" 
-#include "IFormFactorDecorator.pypp.h" 
-#include "InterferenceFunction1DLattice.pypp.h" 
-#include "ISample.pypp.h" 
-#include "ISampleBuilder.pypp.h" 
-#include "PythonInterface_global_variables.pypp.h" 
-#include "Beam.pypp.h" 
-#include "HomogeneousMaterial.pypp.h" 
-#include "ICloneable.pypp.h" 
-#include "ParticleCoreShell.pypp.h" 
-#include "FormFactorDecoratorDebyeWaller.pypp.h" 
-#include "MesoCrystal.pypp.h" 
+#include "Bin1DCVector.pypp.h" 
+#include "DistributionGate.pypp.h" 
+#include "StochasticDoubleGate.pypp.h" 
+#include "IClusteredParticles.pypp.h" 
+#include "FormFactorWeighted.pypp.h" 
+#include "IInterferenceFunction.pypp.h" 
+#include "SimpleSelectionRule.pypp.h" 
+#include "FormFactorLorentz.pypp.h" 
+#include "OutputDataIOFactory.pypp.h" 
+#include "FTDistribution1DCauchy.pypp.h" 
+#include "vector_kvector_t.pypp.h" 
+#include "InterferenceFunction1DParaCrystal.pypp.h" 
+#include "InterferenceFunctionNone.pypp.h" 
+#include "Crystal.pypp.h" 
+#include "FormFactorCuboctahedron.pypp.h" 
+#include "PythonInterface_free_functions.pypp.h" 
 #include "Lattice1DIFParameters.pypp.h" 
+#include "FTDistribution1DGauss.pypp.h" 
+#include "kvector_t.pypp.h" 
+#include "FTDistribution1DVoigt.pypp.h" 
+#include "Simulation.pypp.h" 
+#include "ISample.pypp.h" 
 #include "IObserver.pypp.h" 
-#include "IntensityData.pypp.h" 
-#include "Lattice.pypp.h" 
-#include "IInterferenceFunction.pypp.h" 
-#include "ParticleInfo.pypp.h" 
-#include "Instrument.pypp.h" 
-#include "FormFactorInfLongBox.pypp.h" 
-#include "IntensityDataHelper.pypp.h" 
-#include "FormFactorCone.pypp.h" 
-#include "FTDistribution2DGauss.pypp.h" 
-#include "FormFactorTruncatedSphere.pypp.h" 
-#include "FTDistribution2DVoigt.pypp.h" 
-#include "FormFactorGauss.pypp.h" 
-#include "InterferenceFunction2DParaCrystal.pypp.h" 
-#include "Detector.pypp.h" 
-#include "FormFactorInfLongRipple2.pypp.h" 
-#include "LatticeBasis.pypp.h" 
-#include "ICompositeSample.pypp.h" 
-#include "Bin1D.pypp.h" 
-#include "AxisBin.pypp.h" 
-#include "DistributionLogNormal.pypp.h" 
-#include "IFTDistribution2D.pypp.h" 
+#include "ParticleBuilder.pypp.h" 
+#include "FormFactorSphereGaussianRadius.pypp.h" 
+#include "Lattice2DIFParameters.pypp.h" 
+#include "IFTDistribution1D.pypp.h" 
 #include "__call_policies.pypp.hpp" 
 #include "__convenience.pypp.hpp" 
 

Fit/PythonAPI/src/PythonModule.cpp

@@ -6,38 +6,38 @@ GCC_DIAG_OFF(missing-field-initializers);
 GCC_DIAG_ON(unused-parameter);
 GCC_DIAG_ON(missing-field-initializers);
 
-#include "IntensityFunctionSqrt.pypp.h" 
+#include "FitStrategyFixParameters.pypp.h" 
+#include "AttFitting.pypp.h" 
+#include "FitSuiteObjects.pypp.h" 
+#include "ISquaredFunction.pypp.h" 
 #include "MinimizerFactory.pypp.h" 
-#include "IMinimizer.pypp.h" 
-#include "vector_string_t.pypp.h" 
-#include "SquaredFunctionSystematicError.pypp.h" 
+#include "IntensityScaleAndShiftNormalizer.pypp.h" 
 #include "IntensityNormalizer.pypp.h" 
+#include "SquaredFunctionMeanSquaredError.pypp.h" 
+#include "vector_string_t.pypp.h" 
+#include "MinimizerOptions.pypp.h" 
+#include "IntensityFunctionSqrt.pypp.h" 
+#include "IFitStrategy.pypp.h" 
 #include "IIntensityFunction.pypp.h" 
-#include "INamed.pypp.h" 
-#include "IntensityFunctionLog.pypp.h" 
-#include "FitSuiteParameters.pypp.h" 
-#include "AttFitting.pypp.h" 
 #include "FitParameter.pypp.h" 
-#include "IntensityScaleAndShiftNormalizer.pypp.h" 
-#include "IChiSquaredModule.pypp.h" 
-#include "FitStrategyAdjustMinimizer.pypp.h" 
-#include "IFitStrategy.pypp.h" 
-#include "FitStrategyFixParameters.pypp.h" 
-#include "SquaredFunctionGaussianError.pypp.h" 
-#include "IIntensityNormalizer.pypp.h" 
-#include "FitSuite.pypp.h" 
+#include "FitObject.pypp.h" 
+#include "IMinimizer.pypp.h" 
+#include "INamed.pypp.h" 
+#include "FitStrategyReleaseParameters.pypp.h" 
 #include "FitStrategyAdjustParameters.pypp.h" 
-#include "ChiSquaredModule.pypp.h" 
-#include "MinimizerOptions.pypp.h" 
+#include "IntensityFunctionLog.pypp.h" 
 #include "SquaredFunctionDefault.pypp.h" 
-#include "SquaredFunctionMeanSquaredError.pypp.h" 
-#include "ISquaredFunction.pypp.h" 
+#include "ChiSquaredModule.pypp.h" 
+#include "FitStrategyAdjustMinimizer.pypp.h" 
 #include "FitStrategyDefault.pypp.h" 
+#include "FitSuite.pypp.h" 
+#include "IIntensityNormalizer.pypp.h" 
 #include "AttLimits.pypp.h" 
-#include "FitObject.pypp.h" 
-#include "FitSuiteObjects.pypp.h" 
+#include "IChiSquaredModule.pypp.h" 
 #include "SquaredFunctionSimError.pypp.h" 
-#include "FitStrategyReleaseParameters.pypp.h" 
+#include "FitSuiteParameters.pypp.h" 
+#include "SquaredFunctionSystematicError.pypp.h" 
+#include "SquaredFunctionGaussianError.pypp.h" 
 
 BOOST_PYTHON_MODULE(libBornAgainFit){