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# Segmentation Tutorial July 2024

This is the tutorial for the Students' Meeting held on 16/07/2024 for the INM-4 students. The meeting was organised by Farah Abdellatif and Keith George Ciantar.
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## Notebooks

| Notebook                  | Description                 | Colab  |
| ------------------------- | --------------------------- | ------ |
| shapes.ipynb              | Notebook to create the dataset. The data for the students' meeting has already been generated. | <a target="_blank" href="https://colab.research.google.com/github/KeithGeorgeCiantar/Segmentation-Tutorial/blob/main/shapes.ipynb"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open In Colab"/></a> |
| segmentation_cnn.ipynb    | Notebook to create, train and test a U-Net model. | <a target="_blank" href="https://colab.research.google.com/github/KeithGeorgeCiantar/Segmentation-Tutorial/blob/main/segmentation_cnn.ipynb"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open In Colab"/></a> |
| nnU&#x2011;Net_v1_example.ipynb   | Notebook to install nnU-Net v1, download a pretrained model with some data, and run some inference. | <a target="_blank" href="https://colab.research.google.com/github/KeithGeorgeCiantar/Segmentation-Tutorial/blob/main/nnU-Net_v1_example.ipynb"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open In Colab"/></a> |