git.exc.NoSuchPathError

I'm currently getting the following error when running a study with CADET-RDM

git.exc.NoSuchPathError: /home/IBT/schmoelder/studies/batch_elution/output

To reproduce this issue:

  • Setup project repo (with output directory)
  • Setup remote(s)
  • Push to remote
  • Clone from remote (e.g. on server)
  • run file

I assume this is because since output is in .gitignore, it is not correctly initialized when cloning the repo. Maybe we do need to consider something like adding it as a submodule? (see also #17 (closed)).