git.exc.NoSuchPathError

I'm currently getting the following error when running a study with CADET-RDM

git.exc.NoSuchPathError: /home/IBT/schmoelder/studies/batch_elution/output

To reproduce this issue:

• Setup project repo (with output directory)
• Setup remote(s)
• Push to remote
• Clone from remote (e.g. on server)
• run file

I assume this is because since output is in .gitignore, it is not correctly initialized when cloning the repo. Maybe we do need to consider something like adding it as a submodule? (see also #17 (closed)).

Solved with issue 9c40d69f cadet-cli clone fulfills these requirements

closed

Issue persists for me.

reopened

Ok, issue fixed "itself" (thanks @r.jaepel) by adding the corresponding .json files.

closed

Well, I don't know what I'm doing wrong, but I'm getting this issue again...

reopened

Can you send me a link to the repo-remote you are using?

Here you go: https://jugit.fz-juelich.de/j.schmoelder/ssr_kaspereit

Thanks, I'll also need access to the output repo, to reproduce the error.

Ah yes, of course, sorry! Here you go (again): https://jugit.fz-juelich.de/j.schmoelder/ssr_kaspereit_output/

Resolved by fixing the output_remotes.json and extending the code to include more checks and updates for the output_remotes.json

closed