Error when adding remote repo

❯ cadet-rdm add-remote-to-repo output git@jugit.fz-juelich.de:IBG-1/ModSim/cadet/batch_elution_output.git
Traceback (most recent call last):
  File "/home/jo/software/miniforge3/envs/dev/bin/cadet-rdm", line 8, in <module>
    sys.exit(cli())
  File "/home/jo/software/miniforge3/envs/dev/lib/python3.10/site-packages/click/core.py", line 1157, in __call__
    return self.main(*args, **kwargs)
  File "/home/jo/software/miniforge3/envs/dev/lib/python3.10/site-packages/click/core.py", line 1078, in main
    rv = self.invoke(ctx)
  File "/home/jo/software/miniforge3/envs/dev/lib/python3.10/site-packages/click/core.py", line 1688, in invoke
    return _process_result(sub_ctx.command.invoke(sub_ctx))
  File "/home/jo/software/miniforge3/envs/dev/lib/python3.10/site-packages/click/core.py", line 1434, in invoke
    return ctx.invoke(self.callback, **ctx.params)
  File "/home/jo/software/miniforge3/envs/dev/lib/python3.10/site-packages/click/core.py", line 783, in invoke
    return __callback(*args, **kwargs)
  File "/home/jo/software/miniforge3/envs/dev/lib/python3.10/site-packages/cadetrdm/cli_integration.py", line 46, in add_remote_to_repo
    repo = ProjectRepo(path_to_repo)
  File "/home/jo/software/miniforge3/envs/dev/lib/python3.10/site-packages/cadetrdm/repositories.py", line 393, in __init__
    self._output_repo = ResultsRepo(os.path.join(self.working_dir, self.output_folder))
  File "/home/jo/software/miniforge3/envs/dev/lib/python3.10/site-packages/cadetrdm/repositories.py", line 66, in __init__
    self._git_repo = git.Repo(repository_path, search_parent_directories=search_parent_directories, *args, **kwargs)
  File "/home/jo/software/miniforge3/envs/dev/lib/python3.10/site-packages/git/repo/base.py", line 215, in __init__
    raise NoSuchPathError(epath)
git.exc.NoSuchPathError: /home/jo/code/CADET-Process/projects/diss/batch_elution_rdm/output/output

Which dir are you running this from? The error looks like this was executed in /home/jo/code/CADET-Process/projects/diss/batch_elution_rdm/output, which is why it can not find a repo in cwd/output

Actually, I believe the issue here was that output already existed, but tbh, I can't fully reproduce it.

Anyways, I now tried the following.

mkdir my_new_repo
cd my_new_repo
cadet-rdm initialize-repo .
cadet-rdm add-remote-to-repo git@jugit.fz-juelich.de:IBG-1/path_to_remote.git
cadet-rdm add-remote-to-repo output git@jugit.fz-juelich.de:IBG-1/path_to_remote_output.git

But now I get the following error

Usage: cadet-rdm add-remote-to-repo [OPTIONS] REMOTE_URL
Try 'cadet-rdm add-remote-to-repo -h' for help.

Error: Got unexpected extra argument (git@jugit.fz-juelich.de:IBG-1/path_to_remote_output.git)

Ah, I just checked in the code, it does not actually take a path argument. Maybe we should make this a bit clearer in the README; there it states:

cadet-rdm add-remote-to-repo <path_to_repo> git@<my_git_server.foo>:<project>.git
cadet-rdm add-remote-to-repo <path_to_repo/output_folder> git@<my_git_server.foo>:<project>_output.git

Is there any difference to using the regular git remote add [...]?

Edit:

I'm still confused. When I run

cadet-rdm add-remote-to-repo git@<my_git_server.foo>:<project>.git

from the project root, it works fine.

But when I now cd into the output directory, I get

Traceback (most recent call last):
  File "/home/jo/software/miniforge3/envs/dev/bin/cadet-rdm", line 8, in <module>
    sys.exit(cli())
  File "/home/jo/software/miniforge3/envs/dev/lib/python3.10/site-packages/click/core.py", line 1157, in __call__
    return self.main(*args, **kwargs)
  File "/home/jo/software/miniforge3/envs/dev/lib/python3.10/site-packages/click/core.py", line 1078, in main
    rv = self.invoke(ctx)
  File "/home/jo/software/miniforge3/envs/dev/lib/python3.10/site-packages/click/core.py", line 1688, in invoke
    return _process_result(sub_ctx.command.invoke(sub_ctx))
  File "/home/jo/software/miniforge3/envs/dev/lib/python3.10/site-packages/click/core.py", line 1434, in invoke
    return ctx.invoke(self.callback, **ctx.params)
  File "/home/jo/software/miniforge3/envs/dev/lib/python3.10/site-packages/click/core.py", line 783, in invoke
    return __callback(*args, **kwargs)
  File "/home/jo/software/miniforge3/envs/dev/lib/python3.10/site-packages/cadetrdm/cli_integration.py", line 94, in add_remote_to_repo
    repo = ProjectRepo(".")
  File "/home/jo/software/miniforge3/envs/dev/lib/python3.10/site-packages/cadetrdm/repositories.py", line 383, in __init__
    with open(os.path.join(repository_path, "output_remotes.json"), "r") as handle:
FileNotFoundError: [Errno 2] No such file or directory: './output_remotes.json'

fixed in 6038cf81

closed