From 21fcd49d6983dc06c2462e57e328f57107c21b3a Mon Sep 17 00:00:00 2001
From: "s.islam" <s.islam@fz-juelich.de>
Date: Wed, 20 Apr 2022 10:50:43 +0200
Subject: [PATCH] Running Code: First Version with JSC data path
---
code/data.py | 8 ++++----
1 file changed, 4 insertions(+), 4 deletions(-)
diff --git a/code/data.py b/code/data.py
index 618d680..235cae1 100644
--- a/code/data.py
+++ b/code/data.py
@@ -122,12 +122,12 @@ class TestDataModule(pl.LightningDataModule):
# Load the pyramid/00 per file
#For JSC Training.
- #pli_path = '/p/fastdata/pli/Private/oberstrass1/datasets/vervet1818/vervet1818-stained/data/aligned/pli/NTransmittance'
- #cyto_path = '/p/fastdata/pli/Private/oberstrass1/datasets/vervet1818/vervet1818-stained/data/aligned/stained'
+ pli_path = '/p/fastdata/pli/Private/oberstrass1/datasets/vervet1818/vervet1818-stained/data/aligned/pli/NTransmittance'
+ cyto_path = '/p/fastdata/pli/Private/oberstrass1/datasets/vervet1818/vervet1818-stained/data/aligned/stained'
#For Local Machine Training.
- pli_path = '/media/tushar/A2246889246861F1/Master Thesis MAIA/example-data/pli/NTransmittance'
- cyto_path = '/media/tushar/A2246889246861F1/Master Thesis MAIA/example-data/stained'
+ #pli_path = '/media/tushar/A2246889246861F1/Master Thesis MAIA/example-data/pli/NTransmittance'
+ #cyto_path = '/media/tushar/A2246889246861F1/Master Thesis MAIA/example-data/stained'
pli_files_list = [file for file in os.listdir(pli_path) if
file.endswith(('.h5', '.hdf', '.h4', '.hdf4', '.he2', '.hdf5', '.he5'))]
--
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