diff --git a/App/inc/TestDetectorResolution.h b/App/inc/TestDetectorResolution.h index 061ecd490eb953b46cf1887abbfe5245cfb79cb8..ad15bb53a917c5cad962b5c4997c184172fda37b 100644 --- a/App/inc/TestDetectorResolution.h +++ b/App/inc/TestDetectorResolution.h @@ -20,7 +20,7 @@ #include "OutputData.h" #include "FormFactors.h" #include "ISample.h" -#include "InterferenceFunction1DParaCrystal.h" +#include "InterferenceFunctionRadialParaCrystal.h" #include "InterferenceFunctionNone.h" class TestDetectorResolution : public IApplicationTest diff --git a/App/src/TestDetectorResolution.cpp b/App/src/TestDetectorResolution.cpp index dd973566610a4b8908c3b5f5cacdd8c10d980ee9..695c6cd4570d7fd671a945e6a03f95553e494a49 100644 --- a/App/src/TestDetectorResolution.cpp +++ b/App/src/TestDetectorResolution.cpp @@ -63,8 +63,8 @@ void TestDetectorResolution::initializeSample() air_layer.setMaterial(air_material); Layer substrate_layer; substrate_layer.setMaterial(substrate_material); - InterferenceFunction1DParaCrystal *p_interference_function = - new InterferenceFunction1DParaCrystal(20.0*Units::nanometer, + InterferenceFunctionRadialParaCrystal *p_interference_function = + new InterferenceFunctionRadialParaCrystal(20.0*Units::nanometer, 1e7*Units::nanometer); FTDistribution1DGauss pdf(7*Units::nanometer); p_interference_function->setProbabilityDistribution(pdf); diff --git a/App/src/TestFittingModule1.cpp b/App/src/TestFittingModule1.cpp index f7f8e6a2aa3d538055ec4d29bc6083268a388cce..93e79b9472b4e9ed93cd0488948c5673a79a4043 100644 --- a/App/src/TestFittingModule1.cpp +++ b/App/src/TestFittingModule1.cpp @@ -22,7 +22,7 @@ #include "FormFactors.h" #include "Simulation.h" #include "ISquaredFunction.h" -#include "InterferenceFunction1DParaCrystal.h" +#include "InterferenceFunctionRadialParaCrystal.h" #include "InterferenceFunctionNone.h" #include "IsGISAXSTools.h" #include "Materials.h" diff --git a/App/src/TestFittingModule2.cpp b/App/src/TestFittingModule2.cpp index 786f6d62a350f9e53548131a457a318cec21e470..b05d423614d38083e777487564e8a1313029c82f 100644 --- a/App/src/TestFittingModule2.cpp +++ b/App/src/TestFittingModule2.cpp @@ -25,7 +25,7 @@ #include "Simulation.h" #include "IIntensityFunction.h" #include "IObserver.h" -#include "InterferenceFunction1DParaCrystal.h" +#include "InterferenceFunctionRadialParaCrystal.h" #include "InterferenceFunctionNone.h" #include "IsGISAXSTools.h" #include "Materials.h" diff --git a/App/src/TestFittingModule3.cpp b/App/src/TestFittingModule3.cpp index 44beff258c57c47cd4b4d112cb622845ba1ce8a1..f65321b07727d60d5b846c238f91242b09a15f2e 100644 --- a/App/src/TestFittingModule3.cpp +++ b/App/src/TestFittingModule3.cpp @@ -22,7 +22,7 @@ #include "FitSuiteObserverFactory.h" #include "FormFactors.h" #include "Simulation.h" -#include "InterferenceFunction1DParaCrystal.h" +#include "InterferenceFunctionRadialParaCrystal.h" #include "InterferenceFunctionNone.h" #include "IsGISAXSTools.h" #include "Materials.h" diff --git a/App/src/TestIsGISAXS12.cpp b/App/src/TestIsGISAXS12.cpp index 48ac4e1f3fe10ea132c26f822527c21f8c4c0143..0727f7dee18fa2728a3a867b0f386c78e52588df 100644 --- a/App/src/TestIsGISAXS12.cpp +++ b/App/src/TestIsGISAXS12.cpp @@ -19,7 +19,7 @@ #include "FitSuiteObserverFactory.h" #include "FormFactorCylinder.h" #include "Simulation.h" -#include "InterferenceFunction1DParaCrystal.h" +#include "InterferenceFunctionRadialParaCrystal.h" #include "InterferenceFunctionNone.h" #include "IsGISAXSData.h" #include "IsGISAXSTools.h" @@ -504,8 +504,8 @@ ISample *TestIsGISAXS12::TestSampleBuilder::buildSample() const DistributionGaussian gauss2(radius2, sigma2); ParticleLayout particle_layout; - InterferenceFunction1DParaCrystal *p_interference_function = - new InterferenceFunction1DParaCrystal(m_interf_distance, + InterferenceFunctionRadialParaCrystal *p_interference_function = + new InterferenceFunctionRadialParaCrystal(m_interf_distance, 1e7*Units::nanometer); // peak_distance, corr_length FTDistribution1DGauss pdf(m_interf_width); p_interference_function->setProbabilityDistribution(pdf); diff --git a/App/src/TestIsGISAXS13.cpp b/App/src/TestIsGISAXS13.cpp index c6e3b16f3684560b4c8a2b7bd09d5a9f11b351ce..24031b7b6c8396519b83d3eb5c2d3b20e7d7ff83 100644 --- a/App/src/TestIsGISAXS13.cpp +++ b/App/src/TestIsGISAXS13.cpp @@ -18,7 +18,7 @@ #include "FitSuite.h" #include "FitSuiteObserverFactory.h" #include "Simulation.h" -#include "InterferenceFunction1DParaCrystal.h" +#include "InterferenceFunctionRadialParaCrystal.h" #include "InterferenceFunctionNone.h" #include "IsGISAXSData.h" #include "IsGISAXSTools.h" diff --git a/App/src/TestIsGISAXS5.cpp b/App/src/TestIsGISAXS5.cpp index 144a8fab404252fa2d7b29d77afb7c09a067915a..8ab628613c01b25d6c1c5cba156428f1da5df9df 100644 --- a/App/src/TestIsGISAXS5.cpp +++ b/App/src/TestIsGISAXS5.cpp @@ -19,7 +19,7 @@ #include "FitSuiteObserverFactory.h" #include "FormFactorCylinder.h" #include "Simulation.h" -#include "InterferenceFunction1DParaCrystal.h" +#include "InterferenceFunctionRadialParaCrystal.h" #include "InterferenceFunctionNone.h" #include "IsGISAXSData.h" #include "IsGISAXSTools.h" @@ -294,8 +294,8 @@ ISample *TestIsGISAXS5::SampleBuilder::buildSample() const DistributionGaussian gauss(m_particle_radius, sigma); ParticleLayout particle_layout; - InterferenceFunction1DParaCrystal *p_interference_function = - new InterferenceFunction1DParaCrystal(m_interf_distance, + InterferenceFunctionRadialParaCrystal *p_interference_function = + new InterferenceFunctionRadialParaCrystal(m_interf_distance, 1e7*Units::nanometer); // peak_distance, corr_length FTDistribution1DGauss pdf(m_interf_width); p_interference_function->setProbabilityDistribution(pdf); diff --git a/App/src/TestPyGenerator.cpp b/App/src/TestPyGenerator.cpp index c08449306fefc4efe7d4e0f573ebf582d153481c..27ae79c94f8bb86ce21732c2cf5ddf6c57d7b0ec 100644 --- a/App/src/TestPyGenerator.cpp +++ b/App/src/TestPyGenerator.cpp @@ -6,7 +6,7 @@ #include "ICompositeSample.h" #include "INamed.h" #include "ISample.h" -#include "InterferenceFunction1DParaCrystal.h" +#include "InterferenceFunctionRadialParaCrystal.h" #include "IMaterial.h" #include "InterferenceFunctionNone.h" #include "ISample.h" diff --git a/App/src/TestRipple1.cpp b/App/src/TestRipple1.cpp index 32733cc67817e3b7347321b5c704a90900e71506..3c3ab28762ea44ce32e0f056729a31c90c7f3f81 100644 --- a/App/src/TestRipple1.cpp +++ b/App/src/TestRipple1.cpp @@ -16,7 +16,7 @@ #include "TestRipple1.h" #include "DrawHelper.h" #include "Simulation.h" -#include "InterferenceFunction1DParaCrystal.h" +#include "InterferenceFunctionRadialParaCrystal.h" #include "InterferenceFunctionNone.h" #include "IsGISAXSData.h" #include "IsGISAXSTools.h" @@ -187,8 +187,8 @@ ISample *TestRipple1::TestSampleBuilder::buildSample() const ParticleLayout particle_layout; particle_layout.addParticle(ripple,0.0,1.0); - InterferenceFunction1DParaCrystal *p_interference_function = - new InterferenceFunction1DParaCrystal(m_interf_distance, + InterferenceFunctionRadialParaCrystal *p_interference_function = + new InterferenceFunctionRadialParaCrystal(m_interf_distance, 1e7*Units::nanometer); // peak_distance, corr_length FTDistribution1DGauss pdf(m_interf_width); p_interference_function->setProbabilityDistribution(pdf); diff --git a/App/src/TestRipple2.cpp b/App/src/TestRipple2.cpp index ac7651eb6aaa883db7533f1b026784b1294aad35..16376a73fcfc6ab9f0c6cf16d466282d8b0fa954 100644 --- a/App/src/TestRipple2.cpp +++ b/App/src/TestRipple2.cpp @@ -16,7 +16,7 @@ #include "TestRipple2.h" #include "DrawHelper.h" #include "Simulation.h" -#include "InterferenceFunction1DParaCrystal.h" +#include "InterferenceFunctionRadialParaCrystal.h" #include "InterferenceFunctionNone.h" #include "IsGISAXSData.h" #include "IsGISAXSTools.h" @@ -189,8 +189,8 @@ ISample *TestRipple2::TestSampleBuilder::buildSample() const ParticleLayout particle_layout; particle_layout.addParticle(ripple,0.0,1.0); - InterferenceFunction1DParaCrystal *p_interference_function = - new InterferenceFunction1DParaCrystal(m_interf_distance, + InterferenceFunctionRadialParaCrystal *p_interference_function = + new InterferenceFunctionRadialParaCrystal(m_interf_distance, 1e7*Units::nanometer); // peak_distance, corr_length FTDistribution1DGauss pdf(m_interf_width); p_interference_function->setProbabilityDistribution(pdf); diff --git a/Core/Algorithms/src/SizeSpacingCorrelationApproximationStrategy.cpp b/Core/Algorithms/src/SizeSpacingCorrelationApproximationStrategy.cpp index 7ecc8672d015da44f6eeab17ed041ea12d9dcc6d..b7d4b4391495d57feb63102dc8842ae7f4d55d24 100644 --- a/Core/Algorithms/src/SizeSpacingCorrelationApproximationStrategy.cpp +++ b/Core/Algorithms/src/SizeSpacingCorrelationApproximationStrategy.cpp @@ -14,7 +14,7 @@ // ************************************************************************** // #include "SizeSpacingCorrelationApproximationStrategy.h" -#include "InterferenceFunction1DParaCrystal.h" +#include "InterferenceFunctionRadialParaCrystal.h" #include "MathFunctions.h" SizeSpacingCorrelationApproximationStrategy::SizeSpacingCorrelationApproximationStrategy( @@ -95,8 +95,8 @@ complex_t SizeSpacingCorrelationApproximationStrategy::getCharacteristicDistribution( double qp) const { - const InterferenceFunction1DParaCrystal *p_iff = - dynamic_cast<const InterferenceFunction1DParaCrystal *>(m_ifs[0]); + const InterferenceFunctionRadialParaCrystal *p_iff = + dynamic_cast<const InterferenceFunctionRadialParaCrystal *>(m_ifs[0]); if (p_iff==0) { throw ClassInitializationException("Wrong interference function for SSCA"); } diff --git a/Core/PythonAPI/inc/InterferenceFunction1DParaCrystal.pypp.h b/Core/PythonAPI/inc/InterferenceFunction1DParaCrystal.pypp.h deleted file mode 100644 index 49b328be00de2d0286f6c7ad214601f23762845f..0000000000000000000000000000000000000000 --- a/Core/PythonAPI/inc/InterferenceFunction1DParaCrystal.pypp.h +++ /dev/null @@ -1,11 +0,0 @@ -// This file has been generated by Py++. - -// BornAgain: simulate and fit scattering at grazing incidence -//! @brief Automatically generated boost::python code for PythonCoreAPI - -#ifndef InterferenceFunction1DParaCrystal_hpp__pyplusplus_wrapper -#define InterferenceFunction1DParaCrystal_hpp__pyplusplus_wrapper - -void register_InterferenceFunction1DParaCrystal_class(); - -#endif//InterferenceFunction1DParaCrystal_hpp__pyplusplus_wrapper diff --git a/Core/PythonAPI/inc/InterferenceFunctionRadialParaCrystal.pypp.h b/Core/PythonAPI/inc/InterferenceFunctionRadialParaCrystal.pypp.h new file mode 100644 index 0000000000000000000000000000000000000000..5061820ec8a4b19fbc75ef00b80e2cf5db07f20b --- /dev/null +++ b/Core/PythonAPI/inc/InterferenceFunctionRadialParaCrystal.pypp.h @@ -0,0 +1,11 @@ +// This file has been generated by Py++. + +// BornAgain: simulate and fit scattering at grazing incidence +//! @brief Automatically generated boost::python code for PythonCoreAPI + +#ifndef InterferenceFunctionRadialParaCrystal_hpp__pyplusplus_wrapper +#define InterferenceFunctionRadialParaCrystal_hpp__pyplusplus_wrapper + +void register_InterferenceFunctionRadialParaCrystal_class(); + +#endif//InterferenceFunctionRadialParaCrystal_hpp__pyplusplus_wrapper diff --git a/Core/PythonAPI/inc/PythonCoreList.h b/Core/PythonAPI/inc/PythonCoreList.h index f6eec7c0581b2270c0a41208f4aa620e9313b47c..647752e96d89962d71f583dbb66869c017cb57c4 100644 --- a/Core/PythonAPI/inc/PythonCoreList.h +++ b/Core/PythonAPI/inc/PythonCoreList.h @@ -66,7 +66,7 @@ #include "ISingleton.h" #include "Instrument.h" #include "InterferenceFunction1DLattice.h" -#include "InterferenceFunction1DParaCrystal.h" +#include "InterferenceFunctionRadialParaCrystal.h" #include "InterferenceFunction2DLattice.h" #include "InterferenceFunction2DParaCrystal.h" #include "InterferenceFunctionNone.h" diff --git a/Core/PythonAPI/inc/PythonModule.h b/Core/PythonAPI/inc/PythonModule.h index de3f50ae6298455f7c244b21afdc65cccb09d68f..c1f3cf3c8c04db6bb2c9751cdfea94b58eb69344 100644 --- a/Core/PythonAPI/inc/PythonModule.h +++ b/Core/PythonAPI/inc/PythonModule.h @@ -36,7 +36,7 @@ //#include "IFormFactorDecorator.h" //#include "IInterferenceFunction.h" //#include "InterferenceFunctionNone.h" -//#include "InterferenceFunction1DParaCrystal.h" +//#include "InterferenceFunctionRadialParaCrystal.h" //#include "IMaterial.h" //#include "IParameterized.h" //#include "ISample.h" diff --git a/Core/PythonAPI/src/InterferenceFunction1DParaCrystal.pypp.cpp b/Core/PythonAPI/src/InterferenceFunctionRadialParaCrystal.pypp.cpp similarity index 61% rename from Core/PythonAPI/src/InterferenceFunction1DParaCrystal.pypp.cpp rename to Core/PythonAPI/src/InterferenceFunctionRadialParaCrystal.pypp.cpp index 7efc8d9e30db68d1e0ebc6aacd0cd813ddd04817..736a2332664f07e7368c36faea067c473f9cd37a 100644 --- a/Core/PythonAPI/src/InterferenceFunction1DParaCrystal.pypp.cpp +++ b/Core/PythonAPI/src/InterferenceFunctionRadialParaCrystal.pypp.cpp @@ -12,53 +12,53 @@ GCC_DIAG_ON(missing-field-initializers) #include "__call_policies.pypp.hpp" #include "__convenience.pypp.hpp" #include "PythonCoreList.h" -#include "InterferenceFunction1DParaCrystal.pypp.h" +#include "InterferenceFunctionRadialParaCrystal.pypp.h" namespace bp = boost::python; -struct InterferenceFunction1DParaCrystal_wrapper : InterferenceFunction1DParaCrystal, bp::wrapper< InterferenceFunction1DParaCrystal > { +struct InterferenceFunctionRadialParaCrystal_wrapper : InterferenceFunctionRadialParaCrystal, bp::wrapper< InterferenceFunctionRadialParaCrystal > { - InterferenceFunction1DParaCrystal_wrapper(double peak_distance, double damping_length=0.0 ) - : InterferenceFunction1DParaCrystal( peak_distance, damping_length ) - , bp::wrapper< InterferenceFunction1DParaCrystal >(){ + InterferenceFunctionRadialParaCrystal_wrapper(double peak_distance, double damping_length=0.0 ) + : InterferenceFunctionRadialParaCrystal( peak_distance, damping_length ) + , bp::wrapper< InterferenceFunctionRadialParaCrystal >(){ // constructor m_pyobj = 0; } - virtual ::InterferenceFunction1DParaCrystal * clone( ) const { + virtual ::InterferenceFunctionRadialParaCrystal * clone( ) const { if( bp::override func_clone = this->get_override( "clone" ) ) return func_clone( ); else{ - return this->InterferenceFunction1DParaCrystal::clone( ); + return this->InterferenceFunctionRadialParaCrystal::clone( ); } } - ::InterferenceFunction1DParaCrystal * default_clone( ) const { - return InterferenceFunction1DParaCrystal::clone( ); + ::InterferenceFunctionRadialParaCrystal * default_clone( ) const { + return InterferenceFunctionRadialParaCrystal::clone( ); } virtual double evaluate( ::cvector_t const & q ) const { if( bp::override func_evaluate = this->get_override( "evaluate" ) ) return func_evaluate( boost::ref(q) ); else{ - return this->InterferenceFunction1DParaCrystal::evaluate( boost::ref(q) ); + return this->InterferenceFunctionRadialParaCrystal::evaluate( boost::ref(q) ); } } double default_evaluate( ::cvector_t const & q ) const { - return InterferenceFunction1DParaCrystal::evaluate( boost::ref(q) ); + return InterferenceFunctionRadialParaCrystal::evaluate( boost::ref(q) ); } virtual double getKappa( ) const { if( bp::override func_getKappa = this->get_override( "getKappa" ) ) return func_getKappa( ); else{ - return this->InterferenceFunction1DParaCrystal::getKappa( ); + return this->InterferenceFunctionRadialParaCrystal::getKappa( ); } } double default_getKappa( ) const { - return InterferenceFunction1DParaCrystal::getKappa( ); + return InterferenceFunctionRadialParaCrystal::getKappa( ); } virtual bool areParametersChanged( ) { @@ -192,7 +192,7 @@ struct InterferenceFunction1DParaCrystal_wrapper : InterferenceFunction1DParaCry } static void default_registerParameter( ::IParameterized & inst, ::std::string const & name, long unsigned int parpointer ){ - if( dynamic_cast< InterferenceFunction1DParaCrystal_wrapper * >( boost::addressof( inst ) ) ){ + if( dynamic_cast< InterferenceFunctionRadialParaCrystal_wrapper * >( boost::addressof( inst ) ) ){ inst.::IParameterized::registerParameter(name, reinterpret_cast< double * >( parpointer )); } else{ @@ -252,280 +252,280 @@ struct InterferenceFunction1DParaCrystal_wrapper : InterferenceFunction1DParaCry }; -void register_InterferenceFunction1DParaCrystal_class(){ +void register_InterferenceFunctionRadialParaCrystal_class(){ - { //::InterferenceFunction1DParaCrystal - typedef bp::class_< InterferenceFunction1DParaCrystal_wrapper, bp::bases< IInterferenceFunction >, std::auto_ptr< InterferenceFunction1DParaCrystal_wrapper >, boost::noncopyable > InterferenceFunction1DParaCrystal_exposer_t; - InterferenceFunction1DParaCrystal_exposer_t InterferenceFunction1DParaCrystal_exposer = InterferenceFunction1DParaCrystal_exposer_t( "InterferenceFunction1DParaCrystal", bp::init< double, bp::optional< double > >(( bp::arg("peak_distance"), bp::arg("damping_length")=0.0 )) ); - bp::scope InterferenceFunction1DParaCrystal_scope( InterferenceFunction1DParaCrystal_exposer ); - { //::InterferenceFunction1DParaCrystal::FTPDF + { //::InterferenceFunctionRadialParaCrystal + typedef bp::class_< InterferenceFunctionRadialParaCrystal_wrapper, bp::bases< IInterferenceFunction >, std::auto_ptr< InterferenceFunctionRadialParaCrystal_wrapper >, boost::noncopyable > InterferenceFunctionRadialParaCrystal_exposer_t; + InterferenceFunctionRadialParaCrystal_exposer_t InterferenceFunctionRadialParaCrystal_exposer = InterferenceFunctionRadialParaCrystal_exposer_t( "InterferenceFunctionRadialParaCrystal", bp::init< double, bp::optional< double > >(( bp::arg("peak_distance"), bp::arg("damping_length")=0.0 )) ); + bp::scope InterferenceFunctionRadialParaCrystal_scope( InterferenceFunctionRadialParaCrystal_exposer ); + { //::InterferenceFunctionRadialParaCrystal::FTPDF - typedef ::complex_t ( ::InterferenceFunction1DParaCrystal::*FTPDF_function_type)( double ) const; + typedef ::complex_t ( ::InterferenceFunctionRadialParaCrystal::*FTPDF_function_type)( double ) const; - InterferenceFunction1DParaCrystal_exposer.def( + InterferenceFunctionRadialParaCrystal_exposer.def( "FTPDF" - , FTPDF_function_type( &::InterferenceFunction1DParaCrystal::FTPDF ) + , FTPDF_function_type( &::InterferenceFunctionRadialParaCrystal::FTPDF ) , ( bp::arg("qpar") ) ); } - { //::InterferenceFunction1DParaCrystal::clone + { //::InterferenceFunctionRadialParaCrystal::clone - typedef ::InterferenceFunction1DParaCrystal * ( ::InterferenceFunction1DParaCrystal::*clone_function_type)( ) const; - typedef ::InterferenceFunction1DParaCrystal * ( InterferenceFunction1DParaCrystal_wrapper::*default_clone_function_type)( ) const; + typedef ::InterferenceFunctionRadialParaCrystal * ( ::InterferenceFunctionRadialParaCrystal::*clone_function_type)( ) const; + typedef ::InterferenceFunctionRadialParaCrystal * ( InterferenceFunctionRadialParaCrystal_wrapper::*default_clone_function_type)( ) const; - InterferenceFunction1DParaCrystal_exposer.def( + InterferenceFunctionRadialParaCrystal_exposer.def( "clone" - , clone_function_type(&::InterferenceFunction1DParaCrystal::clone) - , default_clone_function_type(&InterferenceFunction1DParaCrystal_wrapper::default_clone) + , clone_function_type(&::InterferenceFunctionRadialParaCrystal::clone) + , default_clone_function_type(&InterferenceFunctionRadialParaCrystal_wrapper::default_clone) , bp::return_value_policy< bp::manage_new_object >() ); } - { //::InterferenceFunction1DParaCrystal::evaluate + { //::InterferenceFunctionRadialParaCrystal::evaluate - typedef double ( ::InterferenceFunction1DParaCrystal::*evaluate_function_type)( ::cvector_t const & ) const; - typedef double ( InterferenceFunction1DParaCrystal_wrapper::*default_evaluate_function_type)( ::cvector_t const & ) const; + typedef double ( ::InterferenceFunctionRadialParaCrystal::*evaluate_function_type)( ::cvector_t const & ) const; + typedef double ( InterferenceFunctionRadialParaCrystal_wrapper::*default_evaluate_function_type)( ::cvector_t const & ) const; - InterferenceFunction1DParaCrystal_exposer.def( + InterferenceFunctionRadialParaCrystal_exposer.def( "evaluate" - , evaluate_function_type(&::InterferenceFunction1DParaCrystal::evaluate) - , default_evaluate_function_type(&InterferenceFunction1DParaCrystal_wrapper::default_evaluate) + , evaluate_function_type(&::InterferenceFunctionRadialParaCrystal::evaluate) + , default_evaluate_function_type(&InterferenceFunctionRadialParaCrystal_wrapper::default_evaluate) , ( bp::arg("q") ) ); } - { //::InterferenceFunction1DParaCrystal::getDampingLength + { //::InterferenceFunctionRadialParaCrystal::getDampingLength - typedef double ( ::InterferenceFunction1DParaCrystal::*getDampingLength_function_type)( ) const; + typedef double ( ::InterferenceFunctionRadialParaCrystal::*getDampingLength_function_type)( ) const; - InterferenceFunction1DParaCrystal_exposer.def( + InterferenceFunctionRadialParaCrystal_exposer.def( "getDampingLength" - , getDampingLength_function_type( &::InterferenceFunction1DParaCrystal::getDampingLength ) ); + , getDampingLength_function_type( &::InterferenceFunctionRadialParaCrystal::getDampingLength ) ); } - { //::InterferenceFunction1DParaCrystal::getDomainSize + { //::InterferenceFunctionRadialParaCrystal::getDomainSize - typedef double ( ::InterferenceFunction1DParaCrystal::*getDomainSize_function_type)( ) const; + typedef double ( ::InterferenceFunctionRadialParaCrystal::*getDomainSize_function_type)( ) const; - InterferenceFunction1DParaCrystal_exposer.def( + InterferenceFunctionRadialParaCrystal_exposer.def( "getDomainSize" - , getDomainSize_function_type( &::InterferenceFunction1DParaCrystal::getDomainSize ) ); + , getDomainSize_function_type( &::InterferenceFunctionRadialParaCrystal::getDomainSize ) ); } - { //::InterferenceFunction1DParaCrystal::getKappa + { //::InterferenceFunctionRadialParaCrystal::getKappa - typedef double ( ::InterferenceFunction1DParaCrystal::*getKappa_function_type)( ) const; - typedef double ( InterferenceFunction1DParaCrystal_wrapper::*default_getKappa_function_type)( ) const; + typedef double ( ::InterferenceFunctionRadialParaCrystal::*getKappa_function_type)( ) const; + typedef double ( InterferenceFunctionRadialParaCrystal_wrapper::*default_getKappa_function_type)( ) const; - InterferenceFunction1DParaCrystal_exposer.def( + InterferenceFunctionRadialParaCrystal_exposer.def( "getKappa" - , getKappa_function_type(&::InterferenceFunction1DParaCrystal::getKappa) - , default_getKappa_function_type(&InterferenceFunction1DParaCrystal_wrapper::default_getKappa) ); + , getKappa_function_type(&::InterferenceFunctionRadialParaCrystal::getKappa) + , default_getKappa_function_type(&InterferenceFunctionRadialParaCrystal_wrapper::default_getKappa) ); } - { //::InterferenceFunction1DParaCrystal::getPeakDistance + { //::InterferenceFunctionRadialParaCrystal::getPeakDistance - typedef double ( ::InterferenceFunction1DParaCrystal::*getPeakDistance_function_type)( ) const; + typedef double ( ::InterferenceFunctionRadialParaCrystal::*getPeakDistance_function_type)( ) const; - InterferenceFunction1DParaCrystal_exposer.def( + InterferenceFunctionRadialParaCrystal_exposer.def( "getPeakDistance" - , getPeakDistance_function_type( &::InterferenceFunction1DParaCrystal::getPeakDistance ) ); + , getPeakDistance_function_type( &::InterferenceFunctionRadialParaCrystal::getPeakDistance ) ); } - { //::InterferenceFunction1DParaCrystal::getPropabilityDistribution + { //::InterferenceFunctionRadialParaCrystal::getPropabilityDistribution - typedef ::IFTDistribution1D const * ( ::InterferenceFunction1DParaCrystal::*getPropabilityDistribution_function_type)( ) const; + typedef ::IFTDistribution1D const * ( ::InterferenceFunctionRadialParaCrystal::*getPropabilityDistribution_function_type)( ) const; - InterferenceFunction1DParaCrystal_exposer.def( + InterferenceFunctionRadialParaCrystal_exposer.def( "getPropabilityDistribution" - , getPropabilityDistribution_function_type( &::InterferenceFunction1DParaCrystal::getPropabilityDistribution ) + , getPropabilityDistribution_function_type( &::InterferenceFunctionRadialParaCrystal::getPropabilityDistribution ) , bp::return_value_policy< bp::reference_existing_object >() ); } - { //::InterferenceFunction1DParaCrystal::setDomainSize + { //::InterferenceFunctionRadialParaCrystal::setDomainSize - typedef void ( ::InterferenceFunction1DParaCrystal::*setDomainSize_function_type)( double ) ; + typedef void ( ::InterferenceFunctionRadialParaCrystal::*setDomainSize_function_type)( double ) ; - InterferenceFunction1DParaCrystal_exposer.def( + InterferenceFunctionRadialParaCrystal_exposer.def( "setDomainSize" - , setDomainSize_function_type( &::InterferenceFunction1DParaCrystal::setDomainSize ) + , setDomainSize_function_type( &::InterferenceFunctionRadialParaCrystal::setDomainSize ) , ( bp::arg("size") ) ); } - { //::InterferenceFunction1DParaCrystal::setKappa + { //::InterferenceFunctionRadialParaCrystal::setKappa - typedef void ( ::InterferenceFunction1DParaCrystal::*setKappa_function_type)( double ) ; + typedef void ( ::InterferenceFunctionRadialParaCrystal::*setKappa_function_type)( double ) ; - InterferenceFunction1DParaCrystal_exposer.def( + InterferenceFunctionRadialParaCrystal_exposer.def( "setKappa" - , setKappa_function_type( &::InterferenceFunction1DParaCrystal::setKappa ) + , setKappa_function_type( &::InterferenceFunctionRadialParaCrystal::setKappa ) , ( bp::arg("kappa") ) ); } - { //::InterferenceFunction1DParaCrystal::setProbabilityDistribution + { //::InterferenceFunctionRadialParaCrystal::setProbabilityDistribution - typedef void ( ::InterferenceFunction1DParaCrystal::*setProbabilityDistribution_function_type)( ::IFTDistribution1D const & ) ; + typedef void ( ::InterferenceFunctionRadialParaCrystal::*setProbabilityDistribution_function_type)( ::IFTDistribution1D const & ) ; - InterferenceFunction1DParaCrystal_exposer.def( + InterferenceFunctionRadialParaCrystal_exposer.def( "setProbabilityDistribution" - , setProbabilityDistribution_function_type( &::InterferenceFunction1DParaCrystal::setProbabilityDistribution ) + , setProbabilityDistribution_function_type( &::InterferenceFunctionRadialParaCrystal::setProbabilityDistribution ) , ( bp::arg("pdf") ) ); } { //::IParameterized::areParametersChanged typedef bool ( ::IParameterized::*areParametersChanged_function_type)( ) ; - typedef bool ( InterferenceFunction1DParaCrystal_wrapper::*default_areParametersChanged_function_type)( ) ; + typedef bool ( InterferenceFunctionRadialParaCrystal_wrapper::*default_areParametersChanged_function_type)( ) ; - InterferenceFunction1DParaCrystal_exposer.def( + InterferenceFunctionRadialParaCrystal_exposer.def( "areParametersChanged" , areParametersChanged_function_type(&::IParameterized::areParametersChanged) - , default_areParametersChanged_function_type(&InterferenceFunction1DParaCrystal_wrapper::default_areParametersChanged) ); + , default_areParametersChanged_function_type(&InterferenceFunctionRadialParaCrystal_wrapper::default_areParametersChanged) ); } { //::IParameterized::clearParameterPool typedef void ( ::IParameterized::*clearParameterPool_function_type)( ) ; - typedef void ( InterferenceFunction1DParaCrystal_wrapper::*default_clearParameterPool_function_type)( ) ; + typedef void ( InterferenceFunctionRadialParaCrystal_wrapper::*default_clearParameterPool_function_type)( ) ; - InterferenceFunction1DParaCrystal_exposer.def( + InterferenceFunctionRadialParaCrystal_exposer.def( "clearParameterPool" , clearParameterPool_function_type(&::IParameterized::clearParameterPool) - , default_clearParameterPool_function_type(&InterferenceFunction1DParaCrystal_wrapper::default_clearParameterPool) ); + , default_clearParameterPool_function_type(&InterferenceFunctionRadialParaCrystal_wrapper::default_clearParameterPool) ); } { //::ISample::cloneInvertB typedef ::ISample * ( ::ISample::*cloneInvertB_function_type)( ) const; - typedef ::ISample * ( InterferenceFunction1DParaCrystal_wrapper::*default_cloneInvertB_function_type)( ) const; + typedef ::ISample * ( InterferenceFunctionRadialParaCrystal_wrapper::*default_cloneInvertB_function_type)( ) const; - InterferenceFunction1DParaCrystal_exposer.def( + InterferenceFunctionRadialParaCrystal_exposer.def( "cloneInvertB" , cloneInvertB_function_type(&::ISample::cloneInvertB) - , default_cloneInvertB_function_type(&InterferenceFunction1DParaCrystal_wrapper::default_cloneInvertB) + , default_cloneInvertB_function_type(&InterferenceFunctionRadialParaCrystal_wrapper::default_cloneInvertB) , bp::return_value_policy< bp::reference_existing_object >() ); } { //::ISample::containsMagneticMaterial typedef bool ( ::ISample::*containsMagneticMaterial_function_type)( ) const; - typedef bool ( InterferenceFunction1DParaCrystal_wrapper::*default_containsMagneticMaterial_function_type)( ) const; + typedef bool ( InterferenceFunctionRadialParaCrystal_wrapper::*default_containsMagneticMaterial_function_type)( ) const; - InterferenceFunction1DParaCrystal_exposer.def( + InterferenceFunctionRadialParaCrystal_exposer.def( "containsMagneticMaterial" , containsMagneticMaterial_function_type(&::ISample::containsMagneticMaterial) - , default_containsMagneticMaterial_function_type(&InterferenceFunction1DParaCrystal_wrapper::default_containsMagneticMaterial) ); + , default_containsMagneticMaterial_function_type(&InterferenceFunctionRadialParaCrystal_wrapper::default_containsMagneticMaterial) ); } { //::IParameterized::createParameterTree typedef ::ParameterPool * ( ::IParameterized::*createParameterTree_function_type)( ) const; - typedef ::ParameterPool * ( InterferenceFunction1DParaCrystal_wrapper::*default_createParameterTree_function_type)( ) const; + typedef ::ParameterPool * ( InterferenceFunctionRadialParaCrystal_wrapper::*default_createParameterTree_function_type)( ) const; - InterferenceFunction1DParaCrystal_exposer.def( + InterferenceFunctionRadialParaCrystal_exposer.def( "createParameterTree" , createParameterTree_function_type(&::IParameterized::createParameterTree) - , default_createParameterTree_function_type(&InterferenceFunction1DParaCrystal_wrapper::default_createParameterTree) + , default_createParameterTree_function_type(&InterferenceFunctionRadialParaCrystal_wrapper::default_createParameterTree) , bp::return_value_policy< bp::manage_new_object >() ); } { //::ISample::getCompositeSample typedef ::ICompositeSample * ( ::ISample::*getCompositeSample_function_type)( ) ; - typedef ::ICompositeSample * ( InterferenceFunction1DParaCrystal_wrapper::*default_getCompositeSample_function_type)( ) ; + typedef ::ICompositeSample * ( InterferenceFunctionRadialParaCrystal_wrapper::*default_getCompositeSample_function_type)( ) ; - InterferenceFunction1DParaCrystal_exposer.def( + InterferenceFunctionRadialParaCrystal_exposer.def( "getCompositeSample" , getCompositeSample_function_type(&::ISample::getCompositeSample) - , default_getCompositeSample_function_type(&InterferenceFunction1DParaCrystal_wrapper::default_getCompositeSample) + , default_getCompositeSample_function_type(&InterferenceFunctionRadialParaCrystal_wrapper::default_getCompositeSample) , bp::return_value_policy< bp::reference_existing_object >() ); } { //::ISample::getCompositeSample typedef ::ICompositeSample const * ( ::ISample::*getCompositeSample_function_type)( ) const; - typedef ::ICompositeSample const * ( InterferenceFunction1DParaCrystal_wrapper::*default_getCompositeSample_function_type)( ) const; + typedef ::ICompositeSample const * ( InterferenceFunctionRadialParaCrystal_wrapper::*default_getCompositeSample_function_type)( ) const; - InterferenceFunction1DParaCrystal_exposer.def( + InterferenceFunctionRadialParaCrystal_exposer.def( "getCompositeSample" , getCompositeSample_function_type(&::ISample::getCompositeSample) - , default_getCompositeSample_function_type(&InterferenceFunction1DParaCrystal_wrapper::default_getCompositeSample) + , default_getCompositeSample_function_type(&InterferenceFunctionRadialParaCrystal_wrapper::default_getCompositeSample) , bp::return_value_policy< bp::reference_existing_object >() ); } { //::ISample::preprocess typedef bool ( ::ISample::*preprocess_function_type)( ) ; - typedef bool ( InterferenceFunction1DParaCrystal_wrapper::*default_preprocess_function_type)( ) ; + typedef bool ( InterferenceFunctionRadialParaCrystal_wrapper::*default_preprocess_function_type)( ) ; - InterferenceFunction1DParaCrystal_exposer.def( + InterferenceFunctionRadialParaCrystal_exposer.def( "preprocess" , preprocess_function_type(&::ISample::preprocess) - , default_preprocess_function_type(&InterferenceFunction1DParaCrystal_wrapper::default_preprocess) ); + , default_preprocess_function_type(&InterferenceFunctionRadialParaCrystal_wrapper::default_preprocess) ); } { //::IParameterized::printParameters typedef void ( ::IParameterized::*printParameters_function_type)( ) const; - typedef void ( InterferenceFunction1DParaCrystal_wrapper::*default_printParameters_function_type)( ) const; + typedef void ( InterferenceFunctionRadialParaCrystal_wrapper::*default_printParameters_function_type)( ) const; - InterferenceFunction1DParaCrystal_exposer.def( + InterferenceFunctionRadialParaCrystal_exposer.def( "printParameters" , printParameters_function_type(&::IParameterized::printParameters) - , default_printParameters_function_type(&InterferenceFunction1DParaCrystal_wrapper::default_printParameters) ); + , default_printParameters_function_type(&InterferenceFunctionRadialParaCrystal_wrapper::default_printParameters) ); } { //::ISample::printSampleTree typedef void ( ::ISample::*printSampleTree_function_type)( ) ; - typedef void ( InterferenceFunction1DParaCrystal_wrapper::*default_printSampleTree_function_type)( ) ; + typedef void ( InterferenceFunctionRadialParaCrystal_wrapper::*default_printSampleTree_function_type)( ) ; - InterferenceFunction1DParaCrystal_exposer.def( + InterferenceFunctionRadialParaCrystal_exposer.def( "printSampleTree" , printSampleTree_function_type(&::ISample::printSampleTree) - , default_printSampleTree_function_type(&InterferenceFunction1DParaCrystal_wrapper::default_printSampleTree) ); + , default_printSampleTree_function_type(&InterferenceFunctionRadialParaCrystal_wrapper::default_printSampleTree) ); } { //::IParameterized::registerParameter typedef void ( *default_registerParameter_function_type )( ::IParameterized &,::std::string const &,long unsigned int ); - InterferenceFunction1DParaCrystal_exposer.def( + InterferenceFunctionRadialParaCrystal_exposer.def( "registerParameter" - , default_registerParameter_function_type( &InterferenceFunction1DParaCrystal_wrapper::default_registerParameter ) + , default_registerParameter_function_type( &InterferenceFunctionRadialParaCrystal_wrapper::default_registerParameter ) , ( bp::arg("inst"), bp::arg("name"), bp::arg("parpointer") ) ); } { //::IParameterized::setParameterValue typedef bool ( ::IParameterized::*setParameterValue_function_type)( ::std::string const &,double ) ; - typedef bool ( InterferenceFunction1DParaCrystal_wrapper::*default_setParameterValue_function_type)( ::std::string const &,double ) ; + typedef bool ( InterferenceFunctionRadialParaCrystal_wrapper::*default_setParameterValue_function_type)( ::std::string const &,double ) ; - InterferenceFunction1DParaCrystal_exposer.def( + InterferenceFunctionRadialParaCrystal_exposer.def( "setParameterValue" , setParameterValue_function_type(&::IParameterized::setParameterValue) - , default_setParameterValue_function_type(&InterferenceFunction1DParaCrystal_wrapper::default_setParameterValue) + , default_setParameterValue_function_type(&InterferenceFunctionRadialParaCrystal_wrapper::default_setParameterValue) , ( bp::arg("name"), bp::arg("value") ) ); } { //::IParameterized::setParametersAreChanged typedef void ( ::IParameterized::*setParametersAreChanged_function_type)( ) ; - typedef void ( InterferenceFunction1DParaCrystal_wrapper::*default_setParametersAreChanged_function_type)( ) ; + typedef void ( InterferenceFunctionRadialParaCrystal_wrapper::*default_setParametersAreChanged_function_type)( ) ; - InterferenceFunction1DParaCrystal_exposer.def( + InterferenceFunctionRadialParaCrystal_exposer.def( "setParametersAreChanged" , setParametersAreChanged_function_type(&::IParameterized::setParametersAreChanged) - , default_setParametersAreChanged_function_type(&InterferenceFunction1DParaCrystal_wrapper::default_setParametersAreChanged) ); + , default_setParametersAreChanged_function_type(&InterferenceFunctionRadialParaCrystal_wrapper::default_setParametersAreChanged) ); } { //::ICloneable::transferToCPP typedef void ( ::ICloneable::*transferToCPP_function_type)( ) ; - typedef void ( InterferenceFunction1DParaCrystal_wrapper::*default_transferToCPP_function_type)( ) ; + typedef void ( InterferenceFunctionRadialParaCrystal_wrapper::*default_transferToCPP_function_type)( ) ; - InterferenceFunction1DParaCrystal_exposer.def( + InterferenceFunctionRadialParaCrystal_exposer.def( "transferToCPP" , transferToCPP_function_type(&::ICloneable::transferToCPP) - , default_transferToCPP_function_type(&InterferenceFunction1DParaCrystal_wrapper::default_transferToCPP) ); + , default_transferToCPP_function_type(&InterferenceFunctionRadialParaCrystal_wrapper::default_transferToCPP) ); } } diff --git a/Core/PythonAPI/src/PythonModule.cpp b/Core/PythonAPI/src/PythonModule.cpp index 43c2f51e748904d1abac0c19b4c8313fb9be91bd..f8da0464b555b8049ec71c3ac703561ca93ac0b6 100644 --- a/Core/PythonAPI/src/PythonModule.cpp +++ b/Core/PythonAPI/src/PythonModule.cpp @@ -26,6 +26,7 @@ GCC_DIAG_ON(missing-field-initializers) #include "FTDistribution1DCosine.pypp.h" #include "FTDistribution1DTriangle.pypp.h" #include "FormFactorWeighted.pypp.h" +#include "InterferenceFunctionRadialParaCrystal.pypp.h" #include "DistributionGaussian.pypp.h" #include "IDetectorResolution.pypp.h" #include "FormFactorCylinder.pypp.h" @@ -55,7 +56,6 @@ GCC_DIAG_ON(missing-field-initializers) #include "FormFactorSphereUniformRadius.pypp.h" #include "OffSpecSimulation.pypp.h" #include "FormFactorRipple1.pypp.h" -#include "InterferenceFunction1DParaCrystal.pypp.h" #include "Simulation.pypp.h" #include "IObservable.pypp.h" #include "FormFactorLorentz.pypp.h" @@ -235,10 +235,10 @@ BOOST_PYTHON_MODULE(libBornAgainCore){ register_IntensityDataFunctions_class(); register_IntensityDataIOFactory_class(); register_InterferenceFunction1DLattice_class(); - register_InterferenceFunction1DParaCrystal_class(); register_InterferenceFunction2DLattice_class(); register_InterferenceFunction2DParaCrystal_class(); register_InterferenceFunctionNone_class(); + register_InterferenceFunctionRadialParaCrystal_class(); register_Lattice_class(); register_Lattice1DIFParameters_class(); register_Lattice2DIFParameters_class(); diff --git a/Core/Samples/inc/ISampleVisitor.h b/Core/Samples/inc/ISampleVisitor.h index 0cdea97f3f5e02f46d4d5224c4af571797884911..e52e371c659fb79c617b985b29e1b88455caed11 100644 --- a/Core/Samples/inc/ISampleVisitor.h +++ b/Core/Samples/inc/ISampleVisitor.h @@ -93,7 +93,7 @@ class FormFactorDecoratorTransformation; // - class IInterferenceFunction; class InterferenceFunction1DLattice; -class InterferenceFunction1DParaCrystal; +class InterferenceFunctionRadialParaCrystal; class InterferenceFunction2DLattice; class InterferenceFunction2DParaCrystal; class InterferenceFunctionNone; @@ -190,7 +190,7 @@ public: virtual void visit(const IInterferenceFunction *); virtual void visit(const InterferenceFunction1DLattice *); - virtual void visit(const InterferenceFunction1DParaCrystal *); + virtual void visit(const InterferenceFunctionRadialParaCrystal *); virtual void visit(const InterferenceFunction2DLattice *); virtual void visit(const InterferenceFunction2DParaCrystal *); virtual void visit(const InterferenceFunctionNone *); diff --git a/Core/Samples/inc/InterferenceFunction1DParaCrystal.h b/Core/Samples/inc/InterferenceFunctionRadialParaCrystal.h similarity index 79% rename from Core/Samples/inc/InterferenceFunction1DParaCrystal.h rename to Core/Samples/inc/InterferenceFunctionRadialParaCrystal.h index 3bd3e3ba584ac4bcfa8a925429afecadc338104f..55f9b87a86ba1a624c8d514672a142e21a5fc241 100644 --- a/Core/Samples/inc/InterferenceFunction1DParaCrystal.h +++ b/Core/Samples/inc/InterferenceFunctionRadialParaCrystal.h @@ -2,8 +2,8 @@ // // BornAgain: simulate and fit scattering at grazing incidence // -//! @file Samples/inc/InterferenceFunction1DParaCrystal.h -//! @brief Defines class InterferenceFunction1DParaCrystal. +//! @file Samples/inc/InterferenceFunctionRadialParaCrystal.h +//! @brief Defines class InterferenceFunctionRadialParaCrystal. //! //! @homepage http://apps.jcns.fz-juelich.de/BornAgain //! @license GNU General Public License v3 or higher (see COPYING) @@ -13,30 +13,30 @@ // // ************************************************************************** // -#ifndef INTERFERENCEFUNCTION1DPARACRYSTAL_H_ -#define INTERFERENCEFUNCTION1DPARACRYSTAL_H_ +#ifndef INTERFERENCEFUNCTIONRADIALPARACRYSTAL_H_ +#define INTERFERENCEFUNCTIONRADIALPARACRYSTAL_H_ #include "IInterferenceFunction.h" #include "FTDistributions.h" -//! @class InterferenceFunction1DParaCrystal +//! @class InterferenceFunctionRadialParaCrystal //! @ingroup interference -//! @brief Interference function of 1D paracrystal. +//! @brief Interference function of radial paracrystal. -class BA_CORE_API_ InterferenceFunction1DParaCrystal +class BA_CORE_API_ InterferenceFunctionRadialParaCrystal : public IInterferenceFunction { public: - //! @brief constructor of 1D paracrystal interference function + //! @brief constructor of radial paracrystal interference function //! @param peak_distance The distance to the first neighbor peak. //! @param width Width parameter in the pair correlation function. //! @param m_corr_length Correlation length of paracrystal. - InterferenceFunction1DParaCrystal( + InterferenceFunctionRadialParaCrystal( double peak_distance, double damping_length=0.0); - virtual ~InterferenceFunction1DParaCrystal() {} - virtual InterferenceFunction1DParaCrystal *clone() const; + virtual ~InterferenceFunctionRadialParaCrystal() {} + virtual InterferenceFunctionRadialParaCrystal *clone() const; virtual void accept(ISampleVisitor *visitor) const { visitor->visit(this); } @@ -89,6 +89,6 @@ private: virtual void init_parameters(); }; -#endif /* INTERFERENCEFUNCTION1DPARACRYSTAL_H_ */ +#endif /* INTERFERENCEFUNCTIONRADIALPARACRYSTAL_H_ */ diff --git a/Core/Samples/inc/InterferenceFunctions.h b/Core/Samples/inc/InterferenceFunctions.h index 654aa52cd8f9d8ec1d5701fff3cd5b1c3eefed06..ff34cb9fd70dde898ad43172a4b9dc54ffc58e27 100644 --- a/Core/Samples/inc/InterferenceFunctions.h +++ b/Core/Samples/inc/InterferenceFunctions.h @@ -17,7 +17,7 @@ #define INTERFERENCEFUNCTIONS_H_ #include "InterferenceFunctionNone.h" -#include "InterferenceFunction1DParaCrystal.h" +#include "InterferenceFunctionRadialParaCrystal.h" #include "InterferenceFunction1DLattice.h" #include "InterferenceFunction2DLattice.h" #include "InterferenceFunction2DParaCrystal.h" diff --git a/Core/Samples/src/ISampleVisitor.cpp b/Core/Samples/src/ISampleVisitor.cpp index 6a538a36e95c5233b38e65d8ddcd48099434105c..a235d2d7a306f22c9db209cf029eca392b749e92 100644 --- a/Core/Samples/src/ISampleVisitor.cpp +++ b/Core/Samples/src/ISampleVisitor.cpp @@ -382,8 +382,8 @@ void ISampleVisitor::visit(const InterferenceFunction1DLattice *) throw NotImplementedException("ISampleVisitor::visit(const InterferenceFunction1DLattice *) -> Error. Not implemented."); } -void ISampleVisitor::visit(const InterferenceFunction1DParaCrystal *){ - throw NotImplementedException("ISampleVisitor::visit(const InterferenceFunction1DParaCrystal *) -> Error. Not implemented."); +void ISampleVisitor::visit(const InterferenceFunctionRadialParaCrystal *){ + throw NotImplementedException("ISampleVisitor::visit(const InterferenceFunctionRadialParaCrystal *) -> Error. Not implemented."); } diff --git a/Core/Samples/src/InterferenceFunction1DParaCrystal.cpp b/Core/Samples/src/InterferenceFunctionRadialParaCrystal.cpp similarity index 77% rename from Core/Samples/src/InterferenceFunction1DParaCrystal.cpp rename to Core/Samples/src/InterferenceFunctionRadialParaCrystal.cpp index 65b6de955f31eb932c39d4c6382cd78435573e21..2eea179d80f921e5ee09d310ca200ec4da852cde 100644 --- a/Core/Samples/src/InterferenceFunction1DParaCrystal.cpp +++ b/Core/Samples/src/InterferenceFunctionRadialParaCrystal.cpp @@ -2,8 +2,8 @@ // // BornAgain: simulate and fit scattering at grazing incidence // -//! @file Samples/src/InterferenceFunction1DParaCrystal.cpp -//! @brief Implements class InterferenceFunction1DParaCrystal. +//! @file Samples/src/InterferenceFunctionRadialParaCrystal.cpp +//! @brief Implements class InterferenceFunctionRadialParaCrystal. //! //! @homepage http://apps.jcns.fz-juelich.de/BornAgain //! @license GNU General Public License v3 or higher (see COPYING) @@ -13,10 +13,10 @@ // // ************************************************************************** // -#include "InterferenceFunction1DParaCrystal.h" +#include "InterferenceFunctionRadialParaCrystal.h" #include "MathFunctions.h" -InterferenceFunction1DParaCrystal::InterferenceFunction1DParaCrystal( +InterferenceFunctionRadialParaCrystal::InterferenceFunctionRadialParaCrystal( double peak_distance, double damping_length) : m_peak_distance(peak_distance) , m_damping_length(damping_length) @@ -25,14 +25,14 @@ InterferenceFunction1DParaCrystal::InterferenceFunction1DParaCrystal( , m_kappa(0.0) , m_domain_size(0.0) { - setName("InterferenceFunction1DParaCrystal"); + setName("InterferenceFunctionRadialParaCrystal"); if (m_damping_length==0.0) { m_use_damping_length = false; } init_parameters(); } -void InterferenceFunction1DParaCrystal::init_parameters() +void InterferenceFunctionRadialParaCrystal::init_parameters() { clearParameterPool(); registerParameter("peak_distance", &m_peak_distance); @@ -42,9 +42,9 @@ void InterferenceFunction1DParaCrystal::init_parameters() } -InterferenceFunction1DParaCrystal *InterferenceFunction1DParaCrystal::clone() const { - InterferenceFunction1DParaCrystal *result = - new InterferenceFunction1DParaCrystal( +InterferenceFunctionRadialParaCrystal *InterferenceFunctionRadialParaCrystal::clone() const { + InterferenceFunctionRadialParaCrystal *result = + new InterferenceFunctionRadialParaCrystal( m_peak_distance, m_damping_length); result->setName(getName()); result->setDomainSize(getDomainSize()); @@ -56,10 +56,10 @@ InterferenceFunction1DParaCrystal *InterferenceFunction1DParaCrystal::clone() co } -double InterferenceFunction1DParaCrystal::evaluate(const cvector_t& q) const +double InterferenceFunctionRadialParaCrystal::evaluate(const cvector_t& q) const { if (!mp_pdf) { - throw NullPointerException("InterferenceFunction1DParaCrystal::" + throw NullPointerException("InterferenceFunctionRadialParaCrystal::" "evaluate() -> Error! Probability distribution for " "interference funtion not properly initialized"); } @@ -96,7 +96,7 @@ double InterferenceFunction1DParaCrystal::evaluate(const cvector_t& q) const return result; } -complex_t InterferenceFunction1DParaCrystal::FTPDF( +complex_t InterferenceFunctionRadialParaCrystal::FTPDF( double qpar) const { complex_t phase = std::exp(complex_t(0.0, 1.0)*qpar*m_peak_distance); @@ -108,7 +108,7 @@ complex_t InterferenceFunction1DParaCrystal::FTPDF( return result; } -void InterferenceFunction1DParaCrystal::setProbabilityDistribution( +void InterferenceFunctionRadialParaCrystal::setProbabilityDistribution( const IFTDistribution1D &pdf) { if (mp_pdf != &pdf) { @@ -118,7 +118,7 @@ void InterferenceFunction1DParaCrystal::setProbabilityDistribution( } const IFTDistribution1D - *InterferenceFunction1DParaCrystal::getPropabilityDistribution() const + *InterferenceFunctionRadialParaCrystal::getPropabilityDistribution() const { return mp_pdf; } diff --git a/Core/Samples/src/ParticleLayout.cpp b/Core/Samples/src/ParticleLayout.cpp index 1f5805e8039d969979cbb0a300bf3bcd17610f03..47f54a03cfa5f679a0114d769e41738f5f82abf1 100644 --- a/Core/Samples/src/ParticleLayout.cpp +++ b/Core/Samples/src/ParticleLayout.cpp @@ -16,7 +16,7 @@ #include "ParticleLayout.h" #include "InterferenceFunctionNone.h" #include "DecouplingApproximationStrategy.h" -#include "InterferenceFunction1DParaCrystal.h" +#include "InterferenceFunctionRadialParaCrystal.h" #include "SizeSpacingCorrelationApproximationStrategy.h" #include "MessageService.h" #include "ParticleDistribution.h" diff --git a/Core/StandardSamples/IsGISAXS04Builder.cpp b/Core/StandardSamples/IsGISAXS04Builder.cpp index 1dab26359bf4a4bc85a05aa3223c2558f3a3c8a8..6fedca65ca64a0e57552a146d32b0b3b1ec05127 100644 --- a/Core/StandardSamples/IsGISAXS04Builder.cpp +++ b/Core/StandardSamples/IsGISAXS04Builder.cpp @@ -17,7 +17,7 @@ #include "MultiLayer.h" #include "ParticleLayout.h" #include "Materials.h" -#include "InterferenceFunction1DParaCrystal.h" +#include "InterferenceFunctionRadialParaCrystal.h" #include "InterferenceFunction2DParaCrystal.h" #include "FormFactorCylinder.h" #include "Units.h" @@ -54,8 +54,8 @@ ISample *IsGISAXS04Para1DBuilder::buildSample() const Layer air_layer(air_material); Layer substrate_layer(substrate_material); - InterferenceFunction1DParaCrystal *p_interference_function = - new InterferenceFunction1DParaCrystal( + InterferenceFunctionRadialParaCrystal *p_interference_function = + new InterferenceFunctionRadialParaCrystal( m_corr_peak_distance, m_corr_length); FTDistribution1DGauss pdf(m_corr_width); p_interference_function->setProbabilityDistribution(pdf); diff --git a/Core/StandardSamples/IsGISAXS10Builder.cpp b/Core/StandardSamples/IsGISAXS10Builder.cpp index 8ebaae427ae17595a4fac194fc4013bcd1d1c9b2..5d94426aec8be05435ce3e6c856f8beae2c71e26 100644 --- a/Core/StandardSamples/IsGISAXS10Builder.cpp +++ b/Core/StandardSamples/IsGISAXS10Builder.cpp @@ -18,7 +18,7 @@ #include "ParticleLayout.h" #include "Materials.h" #include "FormFactorCylinder.h" -#include "InterferenceFunction1DParaCrystal.h" +#include "InterferenceFunctionRadialParaCrystal.h" #include "Units.h" IsGISAXS10Builder::IsGISAXS10Builder() @@ -48,8 +48,8 @@ ISample *IsGISAXS10Builder::buildSample() const Layer air_layer(air_material); Layer substrate_layer(substrate_material); - InterferenceFunction1DParaCrystal *p_interference_function = - new InterferenceFunction1DParaCrystal(20.0*Units::nanometer, + InterferenceFunctionRadialParaCrystal *p_interference_function = + new InterferenceFunctionRadialParaCrystal(20.0*Units::nanometer, 1e7*Units::nanometer); FTDistribution1DGauss pdf(7*Units::nanometer); p_interference_function->setProbabilityDistribution(pdf); diff --git a/Core/StandardSamples/IsGISAXS15Builder.cpp b/Core/StandardSamples/IsGISAXS15Builder.cpp index a8b9a7b8c1645da932ea61863fba384931092cfe..5a83803c046c3fc235c9d5bb44633cd6c7b6aa13 100644 --- a/Core/StandardSamples/IsGISAXS15Builder.cpp +++ b/Core/StandardSamples/IsGISAXS15Builder.cpp @@ -18,7 +18,7 @@ #include "ParticleLayout.h" #include "Materials.h" #include "Units.h" -#include "InterferenceFunction1DParaCrystal.h" +#include "InterferenceFunctionRadialParaCrystal.h" #include "FormFactorCylinder.h" #include "Distributions.h" #include "ParticleDistribution.h" @@ -37,8 +37,8 @@ ISample *IsGISAXS15Builder::buildSample() const Layer air_layer(air_material); - InterferenceFunction1DParaCrystal *p_interference_function = - new InterferenceFunction1DParaCrystal(15.0*Units::nanometer, + InterferenceFunctionRadialParaCrystal *p_interference_function = + new InterferenceFunctionRadialParaCrystal(15.0*Units::nanometer, 1e3*Units::nanometer); FTDistribution1DGauss pdf(5*Units::nanometer); p_interference_function->setProbabilityDistribution(pdf); diff --git a/Core/StandardSamples/Ripple1Builder.cpp b/Core/StandardSamples/Ripple1Builder.cpp index 5b833593b0d067863c58a0135dff2148b11e5829..872833cb64cade35aff626d5e806ae09de5624ed 100644 --- a/Core/StandardSamples/Ripple1Builder.cpp +++ b/Core/StandardSamples/Ripple1Builder.cpp @@ -19,7 +19,7 @@ #include "Materials.h" #include "FormFactorRipple1.h" #include "Units.h" -#include "InterferenceFunction1DParaCrystal.h" +#include "InterferenceFunctionRadialParaCrystal.h" Ripple1Builder::Ripple1Builder() : m_w(20.0*Units::nanometer) @@ -57,8 +57,8 @@ ISample *Ripple1Builder::buildSample() const ParticleLayout particle_layout; particle_layout.addParticle(ripple,0.0,1.0); - InterferenceFunction1DParaCrystal *p_interference_function = - new InterferenceFunction1DParaCrystal(m_interf_distance, + InterferenceFunctionRadialParaCrystal *p_interference_function = + new InterferenceFunctionRadialParaCrystal(m_interf_distance, 1e7*Units::nanometer); // peak_distance, corr_length FTDistribution1DGauss pdf(m_interf_width); p_interference_function->setProbabilityDistribution(pdf); diff --git a/Core/StandardSamples/Ripple2Builder.cpp b/Core/StandardSamples/Ripple2Builder.cpp index 0bf7d03f581a15939e33c1e4a74144182152c8db..03a734eb00318c139b24744be8f84d2a5305fcad 100644 --- a/Core/StandardSamples/Ripple2Builder.cpp +++ b/Core/StandardSamples/Ripple2Builder.cpp @@ -19,7 +19,7 @@ #include "Materials.h" #include "FormFactorRipple2.h" #include "Units.h" -#include "InterferenceFunction1DParaCrystal.h" +#include "InterferenceFunctionRadialParaCrystal.h" Ripple2Builder::Ripple2Builder() : m_w(20.0*Units::nanometer) @@ -59,8 +59,8 @@ ISample *Ripple2Builder::buildSample() const ParticleLayout particle_layout; particle_layout.addParticle(ripple,0.0,1.0); - InterferenceFunction1DParaCrystal *p_interference_function = - new InterferenceFunction1DParaCrystal(m_interf_distance, + InterferenceFunctionRadialParaCrystal *p_interference_function = + new InterferenceFunctionRadialParaCrystal(m_interf_distance, 1e7*Units::nanometer); // peak_distance, corr_length FTDistribution1DGauss pdf(m_interf_width); p_interference_function->setProbabilityDistribution(pdf); diff --git a/Core/Tools/inc/PyGenVisitor.h b/Core/Tools/inc/PyGenVisitor.h index 4a2242aa45943a4a6e7c34759a407475002b72fd..cda2204149ab813cff9f7082f15a7cf2f42f445f 100644 --- a/Core/Tools/inc/PyGenVisitor.h +++ b/Core/Tools/inc/PyGenVisitor.h @@ -42,7 +42,7 @@ public: void visit(const FormFactorTruncatedSpheroid *sample); void visit(const InterferenceFunctionNone *); void visit(const InterferenceFunction1DLattice *); - void visit(const InterferenceFunction1DParaCrystal *); + void visit(const InterferenceFunctionRadialParaCrystal *); void visit(const InterferenceFunction2DLattice *); void visit(const InterferenceFunction2DParaCrystal *); void visit(const Layer *sample); diff --git a/Core/Tools/inc/SampleMaterialVisitor.h b/Core/Tools/inc/SampleMaterialVisitor.h index ac270dca81e7ea44f675223090059438bde70eb2..763865c6ff1686f0d78794dd96816953d6328052 100644 --- a/Core/Tools/inc/SampleMaterialVisitor.h +++ b/Core/Tools/inc/SampleMaterialVisitor.h @@ -108,7 +108,7 @@ public: virtual void visit(const IInterferenceFunction *sample); virtual void visit(const InterferenceFunction1DLattice *sample); - virtual void visit(const InterferenceFunction1DParaCrystal *sample); + virtual void visit(const InterferenceFunctionRadialParaCrystal *sample); virtual void visit(const InterferenceFunction2DLattice *sample); virtual void visit(const InterferenceFunction2DParaCrystal *sample); virtual void visit(const InterferenceFunctionNone *sample); diff --git a/Core/Tools/inc/SamplePrintVisitor.h b/Core/Tools/inc/SamplePrintVisitor.h index 4f957762b15ac9c7e94e3bf27673016e78ab2cb7..9fdaf2c173100d22ccb4736fa27a07c52b468057 100644 --- a/Core/Tools/inc/SamplePrintVisitor.h +++ b/Core/Tools/inc/SamplePrintVisitor.h @@ -105,7 +105,7 @@ public: virtual void visit(const IInterferenceFunction *sample); virtual void visit(const InterferenceFunction1DLattice *sample); - virtual void visit(const InterferenceFunction1DParaCrystal *sample); + virtual void visit(const InterferenceFunctionRadialParaCrystal *sample); virtual void visit(const InterferenceFunction2DLattice *sample); virtual void visit(const InterferenceFunction2DParaCrystal *sample); virtual void visit(const InterferenceFunctionNone *sample); diff --git a/Core/Tools/src/PyGenVisitor.cpp b/Core/Tools/src/PyGenVisitor.cpp index 80331c2c4518eddd5f0c02e5398ededa609ffc75..d9b0fbda1114008cc0cef93bc2ebe4c181ce465c 100644 --- a/Core/Tools/src/PyGenVisitor.cpp +++ b/Core/Tools/src/PyGenVisitor.cpp @@ -478,11 +478,11 @@ std::string PyGenVisitor::writePyScript(const Simulation *simulation) } } - else if (const InterferenceFunction1DParaCrystal *oneDParaCrystal = - dynamic_cast<const InterferenceFunction1DParaCrystal *>(interference)) + else if (const InterferenceFunctionRadialParaCrystal *oneDParaCrystal = + dynamic_cast<const InterferenceFunctionRadialParaCrystal *>(interference)) { result << "\t" << it->second - << " = InterferenceFunction1DParaCrystal(" + << " = InterferenceFunctionRadialParaCrystal(" << oneDParaCrystal->getPeakDistance() << "*nanometer," << oneDParaCrystal->getDampingLength() << "*nanometer)\n"; @@ -1350,7 +1350,7 @@ void PyGenVisitor::visit(const InterferenceFunction1DLattice *sample) m_label->setLabel(sample); } -void PyGenVisitor::visit(const InterferenceFunction1DParaCrystal *sample) +void PyGenVisitor::visit(const InterferenceFunctionRadialParaCrystal *sample) { m_label->setLabel(sample); } diff --git a/Core/Tools/src/SampleMaterialVisitor.cpp b/Core/Tools/src/SampleMaterialVisitor.cpp index 95168ec7e26293814944287a27664083cb17d3db..d7526ea6fe89b93cd352c2651e3c72a95a12686f 100644 --- a/Core/Tools/src/SampleMaterialVisitor.cpp +++ b/Core/Tools/src/SampleMaterialVisitor.cpp @@ -287,7 +287,7 @@ void SampleMaterialVisitor::visit(const InterferenceFunction1DLattice *) { } -void SampleMaterialVisitor::visit(const InterferenceFunction1DParaCrystal *) +void SampleMaterialVisitor::visit(const InterferenceFunctionRadialParaCrystal *) { } diff --git a/Core/Tools/src/SamplePrintVisitor.cpp b/Core/Tools/src/SamplePrintVisitor.cpp index d2f752ede46de1c6eed071c2b5cdd1a909d16f41..8df9cfdf89ea6549d6b8f43ccaace94673e10aec 100644 --- a/Core/Tools/src/SamplePrintVisitor.cpp +++ b/Core/Tools/src/SamplePrintVisitor.cpp @@ -400,7 +400,7 @@ void SamplePrintVisitor::visit(const InterferenceFunction1DLattice *sample) print_default(sample); } -void SamplePrintVisitor::visit(const InterferenceFunction1DParaCrystal *sample) +void SamplePrintVisitor::visit(const InterferenceFunctionRadialParaCrystal *sample) { print_default(sample); diff --git a/Doc/Doxygen/defgroups.doc b/Doc/Doxygen/defgroups.doc index 718b84ca1506700c9adbf47a33b5e21bd4671faf..4c7745a0dfbbbeb83697b4e3b5d95e632ac8c467 100644 --- a/Doc/Doxygen/defgroups.doc +++ b/Doc/Doxygen/defgroups.doc @@ -66,7 +66,7 @@ A probability distribution function (pdf) is required in order to apply some mo -InterferenceFunction1DParaCrystal (peak\_distance, width, corr\_length) +InterferenceFunctionRadialParaCrystal (peak\_distance, width, corr\_length) where peak\_distance, width, corr\_length are the parameters characterizing the probability distribution function. diff --git a/Doc/UserManual/Theory.tex b/Doc/UserManual/Theory.tex index 0eeb1f194b3cd8762823419354475184010149e3..0d4d80dcc5cb9c43009e609ddc458c35a589720d 100755 --- a/Doc/UserManual/Theory.tex +++ b/Doc/UserManual/Theory.tex @@ -195,7 +195,7 @@ The interference function is specified when building the sample. It is linked wi \begin{itemize} \item \Code{InterferenceFunctionNone()} \item \Code{InterferenceFunction1DLattice(lattice\_parameters)} -\item \Code{InterferenceFunction1DParaCrystal(peak\_distance, width,corr\_length)} +\item \Code{InterferenceFunctionRadialParaCrystal(peak\_distance, width,corr\_length)} \item \Code{InterferenceFunction2DLattice(lattice\_parameters)} \item \Code{InterferenceFunction2DParaCrystal(length\_1, length\_2, $\alpha$\_lattice, $\xi$, \\ damping\_length)} \end{itemize} @@ -306,7 +306,7 @@ def get_sample(): \newpage %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% -\subsubsection{\ding{253} \Code{InterferenceFunction1DParaCrystal(peak\_distance, width, corr\_length)}} +\subsubsection{\ding{253} \Code{InterferenceFunctionRadialParaCrystal(peak\_distance, width, corr\_length)}} \begin{itemize} \item[where] \Code{peak\_distance} is the average distance to the first neighbor peak, \item[]\Code{width} is the width parameter of the probability distribution, @@ -360,7 +360,7 @@ To illustrate the 1D paracrystal interference function, we use the same sample a \begin{lstlisting}[language=python, style=eclipseboxed,numbers=none,nolol,caption={\Code{Python} script to define the 1D paracrystal interference function between half-spheres, where \Code{trsphere} is of type \Code{Particle}.},label={lst:1dpara}] particle_layout = ParticleLayout() particle_layout.addParticle(trsphere, 0.0, 1.0) - interference = InterferenceFunction1DParaCrystal(25.0*nanometer, 7*nanometer, 1e3*nanometer) + interference = InterferenceFunctionRadialParaCrystal(25.0*nanometer, 7*nanometer, 1e3*nanometer) particle_layout.addInterferenceFunction(interference) \end{lstlisting} @@ -500,7 +500,7 @@ Function & Parameters & Comments\\ \Code{InterferenceFunction1DLattice} & \Code{lattice\_length} & use only with infinitely long/wide particles \\ & $\xi=\widehat{(\mathbf{x},\mathbf{a})}$ & pdf=(Cauchy, Gauss or Voigt) to be defined\\ \hline - \Code{InterferenceFunction1DParaCrystal} & peak\_distance of pdf & only Gaussian pdf implemented (no option)\\ + \Code{InterferenceFunctionRadialParaCrystal} & peak\_distance of pdf & only Gaussian pdf implemented (no option)\\ & width of pdf &\\ & corr\_length (optional) & \\ \hline diff --git a/Doc/UserManual/interferences.tex b/Doc/UserManual/interferences.tex index 9ec90a3b41eb38a046f97c65fe6dbdf99149853a..6be86ff674b998134700cc6c300f56952622aa70 100755 --- a/Doc/UserManual/interferences.tex +++ b/Doc/UserManual/interferences.tex @@ -140,7 +140,7 @@ The interference function is specified when building the sample. It is linked wi \begin{itemize} \item \Code{InterferenceFunctionNone()} \item \Code{InterferenceFunction1DLattice(lattice\_parameters)} -\item \Code{InterferenceFunction1DParaCrystal(peak\_distance, width,corr\_length)} +\item \Code{InterferenceFunctionRadialParaCrystal(peak\_distance, width,corr\_length)} \item \Code{InterferenceFunction2DLattice(lattice\_parameters)} \item \Code{InterferenceFunction2DParaCrystal(length\_1, length\_2, $\alpha$\_lattice, $\xi$, \\ corr\_length)} \end{itemize} @@ -258,7 +258,7 @@ def get_sample(): \newpage{\cleardoublepage} %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% -\subsubsection{\ding{253} \Code{InterferenceFunction1DParaCrystal(peak\_distance, width, corr\_length)}} \label{paragraph1dpara} +\subsubsection{\ding{253} \Code{InterferenceFunctionRadialParaCrystal(peak\_distance, width, corr\_length)}} \label{paragraph1dpara} \begin{itemize} \item[where] \Code{peak\_distance} is the average distance to the first neighbor peak, \item[]\Code{width} is the width parameter of the probability distribution, @@ -298,7 +298,7 @@ To illustrate the 1D paracrystal interference function, we use the same sample a \begin{lstlisting}[language=python, style=eclipseboxed,numbers=none,nolol,caption={\Code{Python} script to define the 1D paracrystal interference function between half-spheres, where \Code{trsphere} is of type \Code{Particle}.},label={lst:1dpara}] particle_layout = ParticleLayout() particle_layout.addParticle(trsphere, 0.0, 1.0) - interference = InterferenceFunction1DParaCrystal(25.0*nanometer, 7*nanometer, 1e3*nanometer) + interference = InterferenceFunctionRadialParaCrystal(25.0*nanometer, 7*nanometer, 1e3*nanometer) particle_layout.addInterferenceFunction(interference) \end{lstlisting} @@ -434,7 +434,7 @@ Function & Parameters & Comments\\ \Code{InterferenceFunction1DLattice} & \Code{lattice\_length} & use only with infinitely long/wide particles \\ \ref{paragraph1dlatt} & $\xi=\widehat{(\mathbf{x},\mathbf{a})}$ & pdf=(Cauchy, Gauss or Voigt) to be defined\\ \hline - \Code{InterferenceFunction1DParaCrystal} & peak\_distance of pdf & only Gaussian pdf implemented (no option)\\ + \Code{InterferenceFunctionRadialParaCrystal} & peak\_distance of pdf & only Gaussian pdf implemented (no option)\\ \ref{paragraph1dpara} & width of pdf &\\ & corr\_length (optional) & \\ \hline diff --git a/Examples/Demos/simul_demo_cyl_SSCA.py b/Examples/Demos/simul_demo_cyl_SSCA.py index db1abd44c37b930cb83d9be9c1ba8083fb290531..62121ed22c730483f1ef0edd3124ddc81b00cd64 100644 --- a/Examples/Demos/simul_demo_cyl_SSCA.py +++ b/Examples/Demos/simul_demo_cyl_SSCA.py @@ -27,7 +27,7 @@ def RunSimulation(): particle_layout.addParticle(cylinder1) particle_layout.addParticle(cylinder2) particle_layout.addParticle(cylinder3) - interference = InterferenceFunction1DParaCrystal(5 * nanometer) + interference = InterferenceFunctionRadialParaCrystal(5 * nanometer) pdf = FTDistribution1DGauss(1 * nanometer) interference.setProbabilityDistribution(pdf) # set coupling between size and space diff --git a/Examples/Demos/simul_demo_cylsphere.py b/Examples/Demos/simul_demo_cylsphere.py index 0c5180973d322fd2f9ac109d7f337faffe173b0f..9be7c13f9f2379ae9ac40029318ea6d98467b02d 100644 --- a/Examples/Demos/simul_demo_cylsphere.py +++ b/Examples/Demos/simul_demo_cylsphere.py @@ -23,7 +23,7 @@ def RunSimulation(): particle_layout = ParticleLayout() particle_layout.addParticle(cylinder) particle_layout.addParticle(sphere) - interference = InterferenceFunction1DParaCrystal(20 * nanometer) + interference = InterferenceFunctionRadialParaCrystal(20 * nanometer) pdf = FTDistribution1DGauss(2 * nanometer) interference.setProbabilityDistribution(pdf) particle_layout.addInterferenceFunction(interference) diff --git a/Examples/Demos/simul_demo_movie.py b/Examples/Demos/simul_demo_movie.py index 07673a6c5420e15dc7bc581f210ca10dc4e10565..819aab31e0d8eb777554d3e244f8b6e4b84d2efb 100644 --- a/Examples/Demos/simul_demo_movie.py +++ b/Examples/Demos/simul_demo_movie.py @@ -28,7 +28,7 @@ def RunSimulation(): particle_layout.addParticle(cylinder) # interference function - interference = InterferenceFunction1DParaCrystal(distance) + interference = InterferenceFunctionRadialParaCrystal(distance) pdf = FTDistribution1DGauss(3 * nanometer) interference.setProbabilityDistribution(pdf) particle_layout.addInterferenceFunction(interference) diff --git a/Examples/Demos/simul_demo_movie2.py b/Examples/Demos/simul_demo_movie2.py index 9ccdfa0b5df3bf8e41d359e798569d8202e6ab89..fc14ab64cf37a5d934fcf31ab40caf1f25d6dfc1 100644 --- a/Examples/Demos/simul_demo_movie2.py +++ b/Examples/Demos/simul_demo_movie2.py @@ -27,7 +27,7 @@ def RunSimulation(): particle_layout.addParticle(semisphere) # interference function - interference = InterferenceFunction1DParaCrystal(6 * nanometer) + interference = InterferenceFunctionRadialParaCrystal(6 * nanometer) pdf = FTDistribution1DGauss(1 * nanometer) interference.setProbabilityDistribution(pdf) particle_layout.addInterferenceFunction(interference) diff --git a/Examples/Demos/simul_demo_movie3.py b/Examples/Demos/simul_demo_movie3.py index 6e358c83eb1da155fdf76ac2f0aa168194378690..6663a3104dfcf21c067efdbaa63d69eb53c5475c 100644 --- a/Examples/Demos/simul_demo_movie3.py +++ b/Examples/Demos/simul_demo_movie3.py @@ -31,7 +31,7 @@ def RunSimulation(): particle_layout.addParticle(cylinder1) particle_layout.addParticle(cylinder2) particle_layout.addParticle(cylinder3) - interference = InterferenceFunction1DParaCrystal(6 * nanometer) + interference = InterferenceFunctionRadialParaCrystal(6 * nanometer) pdf = FTDistribution1DGauss(.5 * nanometer) interference.setProbabilityDistribution(pdf) # set coupling between size and space diff --git a/Examples/Demos/simul_demo_polarization.py b/Examples/Demos/simul_demo_polarization.py index f924d53d345c1d18670fa70be8d98bc2374c5f36..4d8a74e087fd6d6baf0c1fa13a36127ae22912a1 100644 --- a/Examples/Demos/simul_demo_polarization.py +++ b/Examples/Demos/simul_demo_polarization.py @@ -26,7 +26,7 @@ def RunSimulation(): particle_layout = ParticleLayout() particle_layout.addParticle(cylinder) # particle_layout.addParticle(sphere) -# interference = InterferenceFunction1DParaCrystal(20 * nanometer, 2 * nanometer) +# interference = InterferenceFunctionRadialParaCrystal(20 * nanometer, 2 * nanometer) # pdf = FTDistribution1DGauss(2 * nanometer) # interference.setProbabilityDistribution(pdf) # particle_layout.addInterferenceFunction(interference) diff --git a/Examples/python/UserManual/UMInterferences1DParaCrystal.py b/Examples/python/UserManual/UMInterferences1DParaCrystal.py index cd18a39f3c1f3c3a75372bff0b4cb94583f1f985..6434c077c0e66cc244116563df1a2d8cec3cfa03 100644 --- a/Examples/python/UserManual/UMInterferences1DParaCrystal.py +++ b/Examples/python/UserManual/UMInterferences1DParaCrystal.py @@ -20,7 +20,7 @@ def get_sample(): particle_layout.addParticle(sphere, 0.0, 1.0) # interferences - interference = InterferenceFunction1DParaCrystal(25.0*nanometer, 1e3*nanometer) + interference = InterferenceFunctionRadialParaCrystal(25.0*nanometer, 1e3*nanometer) pdf = FTDistribution1DGauss(7 * nanometer) interference.setProbabilityDistribution(pdf) particle_layout.addInterferenceFunction(interference) diff --git a/Examples/python/simulation/ex03_InterferenceFunctions/InterferenceParaCrystal1D.py b/Examples/python/simulation/ex03_InterferenceFunctions/InterferenceParaCrystal1D.py index c8b8d385969a488f35136af124758ed23a71a1bc..e8a7f1d9f5e5b2153d9d762ba012b7c9a724d5f1 100644 --- a/Examples/python/simulation/ex03_InterferenceFunctions/InterferenceParaCrystal1D.py +++ b/Examples/python/simulation/ex03_InterferenceFunctions/InterferenceParaCrystal1D.py @@ -23,7 +23,7 @@ def get_sample(): cylinder_ff = FormFactorCylinder(5*nanometer, 5*nanometer) cylinder = Particle(m_particle, cylinder_ff) - interference = InterferenceFunction1DParaCrystal(20.0*nanometer, 1e3*nanometer) + interference = InterferenceFunctionRadialParaCrystal(20.0*nanometer, 1e3*nanometer) pdf = FTDistribution1DGauss(7 * nanometer) interference.setProbabilityDistribution(pdf) diff --git a/GUI/coregui/Models/GUIObjectBuilder.cpp b/GUI/coregui/Models/GUIObjectBuilder.cpp index 8de04c501f8f41d66babb17c4892a0a5da1a1ee6..4b304e801c82add87ac2e18e7a6a226cb682763d 100644 --- a/GUI/coregui/Models/GUIObjectBuilder.cpp +++ b/GUI/coregui/Models/GUIObjectBuilder.cpp @@ -579,12 +579,12 @@ void GUIObjectBuilder::visit(const FormFactorTruncatedSpheroid *sample) m_levelToParentItem[getLevel()] = particleItem; } -void GUIObjectBuilder::visit(const InterferenceFunction1DParaCrystal *sample) +void GUIObjectBuilder::visit(const InterferenceFunctionRadialParaCrystal *sample) { ParameterizedItem *parent = m_levelToParentItem[getLevel()-1]; Q_ASSERT(parent); ParameterizedItem *item = m_sampleModel->insertNewItem( - Constants::InterferenceFunction1DParaCrystalType, + Constants::InterferenceFunctionRadialParaCrystalType, m_sampleModel->indexOfItem(parent)); Q_ASSERT(item); TransformFromDomain::setItemFromSample(item, sample); diff --git a/GUI/coregui/Models/GUIObjectBuilder.h b/GUI/coregui/Models/GUIObjectBuilder.h index 23ba1c9b4de163dfd60581b1e06ec1977d149f9e..cfac7d1f293d6b203150f03986809c7a4165757c 100644 --- a/GUI/coregui/Models/GUIObjectBuilder.h +++ b/GUI/coregui/Models/GUIObjectBuilder.h @@ -74,7 +74,7 @@ public: void visit(const FormFactorTruncatedSphere *); void visit(const FormFactorTruncatedSpheroid *); - void visit(const InterferenceFunction1DParaCrystal *); + void visit(const InterferenceFunctionRadialParaCrystal *); void visit(const InterferenceFunction2DParaCrystal *); void visit(const InterferenceFunction2DLattice *); void visit(const InterferenceFunctionNone *); diff --git a/GUI/coregui/Models/InterferenceFunctionItems.cpp b/GUI/coregui/Models/InterferenceFunctionItems.cpp index 6b437b51d87dd7e4732a5cc7d70d7b8e7ae76553..68ddc0cb6f7a522f5c5ed73a6a413ec88dd78957 100644 --- a/GUI/coregui/Models/InterferenceFunctionItems.cpp +++ b/GUI/coregui/Models/InterferenceFunctionItems.cpp @@ -2,15 +2,15 @@ #include "Units.h" #include <QDebug> -const QString InterferenceFunction1DParaCrystalItem::P_PEAK_DISTANCE = +const QString InterferenceFunctionRadialParaCrystalItem::P_PEAK_DISTANCE = "Peak_distance"; -const QString InterferenceFunction1DParaCrystalItem::P_DAMPING_LENGTH = +const QString InterferenceFunctionRadialParaCrystalItem::P_DAMPING_LENGTH = "Damping_length"; -const QString InterferenceFunction1DParaCrystalItem::P_DOMAIN_SIZE = +const QString InterferenceFunctionRadialParaCrystalItem::P_DOMAIN_SIZE = "Domain_size"; -const QString InterferenceFunction1DParaCrystalItem::P_KAPPA = +const QString InterferenceFunctionRadialParaCrystalItem::P_KAPPA = "Size_space_coupling"; -const QString InterferenceFunction1DParaCrystalItem::P_PDF = "PDF"; +const QString InterferenceFunctionRadialParaCrystalItem::P_PDF = "PDF"; const QString InterferenceFunction2DParaCrystalItem::P_LATTICE_TYPE = "Lattice_type"; @@ -33,12 +33,12 @@ const QString InterferenceFunction2DLatticeItem::P_ROTATION_ANGLE = "Rotation_angle"; const QString InterferenceFunction2DLatticeItem::P_PDF = "PDF"; -InterferenceFunction1DParaCrystalItem::InterferenceFunction1DParaCrystalItem( +InterferenceFunctionRadialParaCrystalItem::InterferenceFunctionRadialParaCrystalItem( ParameterizedItem *parent) - : ParameterizedGraphicsItem(Constants::InterferenceFunction1DParaCrystalType, + : ParameterizedGraphicsItem(Constants::InterferenceFunctionRadialParaCrystalType, parent) { - setItemName(Constants::InterferenceFunction1DParaCrystalType); + setItemName(Constants::InterferenceFunctionRadialParaCrystalType); setItemPort(ParameterizedItem::PortInfo::PORT_1); registerProperty(P_PEAK_DISTANCE, 20.0*Units::nanometer); registerProperty(P_DAMPING_LENGTH, 1000.0*Units::micrometer); diff --git a/GUI/coregui/Models/InterferenceFunctionItems.h b/GUI/coregui/Models/InterferenceFunctionItems.h index 3119e737556f5c6e27279dc4693a6fc43e421d88..5679f045a5647353989f4cbe82ec226b7283a7b0 100644 --- a/GUI/coregui/Models/InterferenceFunctionItems.h +++ b/GUI/coregui/Models/InterferenceFunctionItems.h @@ -4,7 +4,7 @@ #include "ParameterizedGraphicsItem.h" -class BA_CORE_API_ InterferenceFunction1DParaCrystalItem : public ParameterizedGraphicsItem +class BA_CORE_API_ InterferenceFunctionRadialParaCrystalItem : public ParameterizedGraphicsItem { Q_OBJECT public: @@ -13,8 +13,8 @@ public: static const QString P_DOMAIN_SIZE; static const QString P_KAPPA; static const QString P_PDF; - explicit InterferenceFunction1DParaCrystalItem(ParameterizedItem *parent=0); - ~InterferenceFunction1DParaCrystalItem(){} + explicit InterferenceFunctionRadialParaCrystalItem(ParameterizedItem *parent=0); + ~InterferenceFunctionRadialParaCrystalItem(){} }; diff --git a/GUI/coregui/Models/ItemFactory.cpp b/GUI/coregui/Models/ItemFactory.cpp index ab8e005fc83cfcdcbe686cff05943d29364bab9f..54d5a413ccb38ebaa852226c8d894f927cb11664 100644 --- a/GUI/coregui/Models/ItemFactory.cpp +++ b/GUI/coregui/Models/ItemFactory.cpp @@ -52,7 +52,7 @@ ItemFactory::ItemMap_t initializeItemMap() { result[Constants::TransformationType] = &createInstance<TransformationItem>; result[Constants::ParticleCoreShellType] = &createInstance<ParticleCoreShellItem>; result[Constants::ParticleDistributionType] = &createInstance<ParticleDistributionItem>; - result[Constants::InterferenceFunction1DParaCrystalType] = &createInstance<InterferenceFunction1DParaCrystalItem>; + result[Constants::InterferenceFunctionRadialParaCrystalType] = &createInstance<InterferenceFunctionRadialParaCrystalItem>; result[Constants::InterferenceFunction2DParaCrystalType] = &createInstance<InterferenceFunction2DParaCrystalItem>; result[Constants::InterferenceFunction2DLatticeType] = &createInstance<InterferenceFunction2DLatticeItem>; result[Constants::InstrumentType] = &createInstance<InstrumentItem>; @@ -133,7 +133,7 @@ QStringList ItemFactory::m_valid_top_item_names = QStringList() << Constants::TransformationType << Constants::ParticleCoreShellType << Constants::ParticleDistributionType - << Constants::InterferenceFunction1DParaCrystalType + << Constants::InterferenceFunctionRadialParaCrystalType << Constants::InterferenceFunction2DParaCrystalType << Constants::InterferenceFunction2DLatticeType; diff --git a/GUI/coregui/Models/ParticleLayoutItem.cpp b/GUI/coregui/Models/ParticleLayoutItem.cpp index ec3d5ccaa1afc23820065011d7eec8ab1c0c3aa0..4938b37d33002e9081294b32992e2dd6af7897d6 100644 --- a/GUI/coregui/Models/ParticleLayoutItem.cpp +++ b/GUI/coregui/Models/ParticleLayoutItem.cpp @@ -33,7 +33,7 @@ ParticleLayoutItem::ParticleLayoutItem(ParameterizedItem *parent) addToValidChildren(Constants::ParticleType, PortInfo::PORT_0); addToValidChildren(Constants::ParticleCoreShellType, PortInfo::PORT_0); addToValidChildren(Constants::ParticleDistributionType, PortInfo::PORT_0); - addToValidChildren(Constants::InterferenceFunction1DParaCrystalType, PortInfo::PORT_1, 1); + addToValidChildren(Constants::InterferenceFunctionRadialParaCrystalType, PortInfo::PORT_1, 1); addToValidChildren(Constants::InterferenceFunction2DParaCrystalType, PortInfo::PORT_1, 1); addToValidChildren(Constants::InterferenceFunction2DLatticeType, PortInfo::PORT_1, 1); } diff --git a/GUI/coregui/Models/TransformFromDomain.cpp b/GUI/coregui/Models/TransformFromDomain.cpp index 36da2c02adb35e04c0278ea859e99db52ffa1714..9f3cc0ff05375e13908f00852ebf050619df37af 100644 --- a/GUI/coregui/Models/TransformFromDomain.cpp +++ b/GUI/coregui/Models/TransformFromDomain.cpp @@ -30,24 +30,24 @@ void TransformFromDomain::setItemFromSample(ParameterizedItem *item, - const InterferenceFunction1DParaCrystal *sample) + const InterferenceFunctionRadialParaCrystal *sample) { item->setRegisteredProperty( - InterferenceFunction1DParaCrystalItem::P_PEAK_DISTANCE, + InterferenceFunctionRadialParaCrystalItem::P_PEAK_DISTANCE, sample->getPeakDistance() ); item->setRegisteredProperty( - InterferenceFunction1DParaCrystalItem::P_DAMPING_LENGTH, + InterferenceFunctionRadialParaCrystalItem::P_DAMPING_LENGTH, sample->getDampingLength() ); item->setRegisteredProperty( - InterferenceFunction1DParaCrystalItem::P_DOMAIN_SIZE, + InterferenceFunctionRadialParaCrystalItem::P_DOMAIN_SIZE, sample->getDomainSize() ); item->setRegisteredProperty( - InterferenceFunction1DParaCrystalItem::P_KAPPA, + InterferenceFunctionRadialParaCrystalItem::P_KAPPA, sample->getKappa() ); const IFTDistribution1D *ipdf = sample->getPropabilityDistribution(); - QString group_name = InterferenceFunction1DParaCrystalItem::P_PDF; + QString group_name = InterferenceFunctionRadialParaCrystalItem::P_PDF; qDebug() << " group_name" << group_name; if(const FTDistribution1DCauchy *pdf = diff --git a/GUI/coregui/Models/TransformFromDomain.h b/GUI/coregui/Models/TransformFromDomain.h index 981eb70f5c246f4c46baefc34328652ed08adee1..99e4be8eabedfc7f9d37b058719aa56429d40fdf 100644 --- a/GUI/coregui/Models/TransformFromDomain.h +++ b/GUI/coregui/Models/TransformFromDomain.h @@ -6,7 +6,7 @@ class FormFactorAnisoPyramid; class ParameterizedItem; -class InterferenceFunction1DParaCrystal; +class InterferenceFunctionRadialParaCrystal; class InterferenceFunction2DParaCrystal; class InterferenceFunction2DLattice; class LayerRoughness; @@ -21,7 +21,7 @@ BA_CORE_API_ void setItemFromSample(ParameterizedItem *item, const FormFactorAnisoPyramid *sample); BA_CORE_API_ void setItemFromSample(ParameterizedItem *item, - const InterferenceFunction1DParaCrystal *sample); + const InterferenceFunctionRadialParaCrystal *sample); BA_CORE_API_ void setItemFromSample(ParameterizedItem *item, const InterferenceFunction2DParaCrystal *sample); diff --git a/GUI/coregui/Models/TransformToDomain.cpp b/GUI/coregui/Models/TransformToDomain.cpp index 40a5bda94b329e0525b4f01e771974c31be96bd7..fa386bc687f0c6b3bfe3441a24cd4d286f9f05ce 100644 --- a/GUI/coregui/Models/TransformToDomain.cpp +++ b/GUI/coregui/Models/TransformToDomain.cpp @@ -136,27 +136,27 @@ IDistribution1D *TransformToDomain::createDistribution( IInterferenceFunction *TransformToDomain::createInterferenceFunction( const ParameterizedItem &item) { - if(item.modelType() == Constants::InterferenceFunction1DParaCrystalType) { + if(item.modelType() == Constants::InterferenceFunctionRadialParaCrystalType) { double peak_distance = item.getRegisteredProperty( - InterferenceFunction1DParaCrystalItem::P_PEAK_DISTANCE) + InterferenceFunctionRadialParaCrystalItem::P_PEAK_DISTANCE) .toDouble(); double damping_length = item.getRegisteredProperty( - InterferenceFunction1DParaCrystalItem::P_DAMPING_LENGTH) + InterferenceFunctionRadialParaCrystalItem::P_DAMPING_LENGTH) .toDouble(); double domain_size = item.getRegisteredProperty( - InterferenceFunction1DParaCrystalItem::P_DOMAIN_SIZE) + InterferenceFunctionRadialParaCrystalItem::P_DOMAIN_SIZE) .toDouble(); double kappa = item.getRegisteredProperty( - InterferenceFunction1DParaCrystalItem::P_KAPPA) + InterferenceFunctionRadialParaCrystalItem::P_KAPPA) .toDouble(); - InterferenceFunction1DParaCrystal *result = - new InterferenceFunction1DParaCrystal(peak_distance, + InterferenceFunctionRadialParaCrystal *result = + new InterferenceFunctionRadialParaCrystal(peak_distance, damping_length); result->setDomainSize(domain_size); result->setKappa(kappa); ParameterizedItem *pdfItem = item.getSubItems()[ - InterferenceFunction1DParaCrystalItem::P_PDF]; + InterferenceFunctionRadialParaCrystalItem::P_PDF]; Q_ASSERT(pdfItem); boost::scoped_ptr<IFTDistribution1D> pdf( diff --git a/GUI/coregui/Models/item_constants.h b/GUI/coregui/Models/item_constants.h index c529acd53f8ffb1c07af99919397ccce2bf79bca..cc084d62298852ac808808fc56431f1efab34853 100644 --- a/GUI/coregui/Models/item_constants.h +++ b/GUI/coregui/Models/item_constants.h @@ -16,7 +16,7 @@ const ModelType ParticleLayoutType = "ParticleLayout"; const ModelType ParticleCoreShellType = "ParticleCoreShell"; const ModelType ParticleDistributionType = "ParticleDistribution"; const ModelType TransformationType = "Transformation"; -const ModelType InterferenceFunction1DParaCrystalType = "InterferenceFunction1DParaCrystal"; +const ModelType InterferenceFunctionRadialParaCrystalType = "InterferenceFunctionRadialParaCrystal"; const ModelType InterferenceFunction2DParaCrystalType = "InterferenceFunction2DParaCrystal"; const ModelType InterferenceFunction2DLatticeType = "InterferenceFunction2DLattice"; const ModelType InstrumentType = "Instrument"; diff --git a/GUI/coregui/Views/Components/SampleDesigner/DesignerHelper.h b/GUI/coregui/Views/Components/SampleDesigner/DesignerHelper.h index 0a4ba970a21f3cb0661dfb8e4fbd118429c7cbca..518fc2850f8a40b80e7ac401f67654f7c3d2aaa5 100644 --- a/GUI/coregui/Views/Components/SampleDesigner/DesignerHelper.h +++ b/GUI/coregui/Views/Components/SampleDesigner/DesignerHelper.h @@ -22,7 +22,7 @@ public: LAYER, PARTICLE_LAYOUT, INTERFERENCE_FUNCTION, - INTERFERENCE_FUNCTION_1D_PARA, + INTERFERENCE_FUNCTION_RADIAL_PARA, INTERFERENCE_FUNCTION_2D_PARA, INTERFERENCE_FUNCTION_2D_LATTICE, PARTICLE, diff --git a/GUI/coregui/Views/Components/SampleDesigner/InterferenceFunctionViews.cpp b/GUI/coregui/Views/Components/SampleDesigner/InterferenceFunctionViews.cpp index bfce9ace47b51b80f7fd83492e5db10ff480e551..b8574f64ede21236df402ac9bc59263b747763ec 100644 --- a/GUI/coregui/Views/Components/SampleDesigner/InterferenceFunctionViews.cpp +++ b/GUI/coregui/Views/Components/SampleDesigner/InterferenceFunctionViews.cpp @@ -3,10 +3,10 @@ #include "item_constants.h" -InterferenceFunction1DParaCrystalView::InterferenceFunction1DParaCrystalView(QGraphicsItem *parent) +InterferenceFunctionRadialParaCrystalView::InterferenceFunctionRadialParaCrystalView(QGraphicsItem *parent) : ConnectableView(parent) { - setName(Constants::InterferenceFunction1DParaCrystalType); + setName(Constants::InterferenceFunctionRadialParaCrystalType); setLabel("Interference \n1D paracrystal"); setColor(QColor(255, 236, 139)); setRectangle( DesignerHelper::getDefaultBoundingRect(getName()) ); diff --git a/GUI/coregui/Views/Components/SampleDesigner/InterferenceFunctionViews.h b/GUI/coregui/Views/Components/SampleDesigner/InterferenceFunctionViews.h index bc50a9a83fe4fd3a7c8f0f5cc440e2d14606269c..40bd6a5084d116134a93ff0b44c31cdcd694500a 100644 --- a/GUI/coregui/Views/Components/SampleDesigner/InterferenceFunctionViews.h +++ b/GUI/coregui/Views/Components/SampleDesigner/InterferenceFunctionViews.h @@ -4,14 +4,14 @@ #include "ConnectableView.h" -class BA_CORE_API_ InterferenceFunction1DParaCrystalView : public ConnectableView +class BA_CORE_API_ InterferenceFunctionRadialParaCrystalView : public ConnectableView { Q_OBJECT public: - enum { TYPE = DesignerHelper::INTERFERENCE_FUNCTION_1D_PARA }; + enum { TYPE = DesignerHelper::INTERFERENCE_FUNCTION_RADIAL_PARA }; - InterferenceFunction1DParaCrystalView(QGraphicsItem *parent = 0); + InterferenceFunctionRadialParaCrystalView(QGraphicsItem *parent = 0); int type() const { return TYPE; } }; diff --git a/GUI/coregui/Views/Components/SampleDesigner/ParticleLayoutView.cpp b/GUI/coregui/Views/Components/SampleDesigner/ParticleLayoutView.cpp index 0227a9b104688d72474e1424788ee69bc969bb8f..d343187dfcbcf7b416e8a0b4e31345be7c819ab7 100644 --- a/GUI/coregui/Views/Components/SampleDesigner/ParticleLayoutView.cpp +++ b/GUI/coregui/Views/Components/SampleDesigner/ParticleLayoutView.cpp @@ -26,7 +26,7 @@ void ParticleLayoutView::addView(IView *childView, int /* row */) if(childView->type() == DesignerHelper::PARTICLE) { connectInputPort(dynamic_cast<ConnectableView *>(childView), 0); } - else if(childView->type() == DesignerHelper::INTERFERENCE_FUNCTION_1D_PARA + else if(childView->type() == DesignerHelper::INTERFERENCE_FUNCTION_RADIAL_PARA || childView->type() == DesignerHelper::INTERFERENCE_FUNCTION_2D_PARA || childView->type() == DesignerHelper::INTERFERENCE_FUNCTION_2D_LATTICE) { connectInputPort(dynamic_cast<ConnectableView *>(childView), 1); diff --git a/GUI/coregui/Views/Components/SampleDesigner/SampleViewFactory.cpp b/GUI/coregui/Views/Components/SampleDesigner/SampleViewFactory.cpp index 24461676a4fc8b19338c4612b0cb967841c34366..bbda913155452196ed42d4772cabbed0c73674c4 100644 --- a/GUI/coregui/Views/Components/SampleDesigner/SampleViewFactory.cpp +++ b/GUI/coregui/Views/Components/SampleDesigner/SampleViewFactory.cpp @@ -20,7 +20,7 @@ QStringList SampleViewFactory::m_valid_item_names = QStringList() << Constants::TransformationType << Constants::ParticleCoreShellType << Constants::ParticleDistributionType - << Constants::InterferenceFunction1DParaCrystalType + << Constants::InterferenceFunctionRadialParaCrystalType << Constants::InterferenceFunction2DParaCrystalType << Constants::InterferenceFunction2DLatticeType; @@ -58,8 +58,8 @@ IView *SampleViewFactory::createSampleView(const QString &name) else if (name==Constants::ParticleDistributionType) { return new ParticleDistributionView(); } - else if (name==Constants::InterferenceFunction1DParaCrystalType) { - return new InterferenceFunction1DParaCrystalView(); + else if (name==Constants::InterferenceFunctionRadialParaCrystalType) { + return new InterferenceFunctionRadialParaCrystalView(); } else if (name==Constants::InterferenceFunction2DParaCrystalType) { return new InterferenceFunction2DParaCrystalView(); diff --git a/GUI/coregui/Views/Components/widgetbox/widgetbox.xml b/GUI/coregui/Views/Components/widgetbox/widgetbox.xml index 700c10c0a92d400637d92b0195772e4f8fa9e43c..02298401f2467800e201fa6ccb6ba14daf8646da 100644 --- a/GUI/coregui/Views/Components/widgetbox/widgetbox.xml +++ b/GUI/coregui/Views/Components/widgetbox/widgetbox.xml @@ -36,7 +36,7 @@ <category name="Interference functions"> <categoryentry name="1D paracrystal" icon="images/ParaCrystal1D.png"> - <widget class="InterferenceFunction1DParaCrystal"> + <widget class="InterferenceFunctionRadialParaCrystal"> <property name="objectName"> <string notr="true">somestring</string> </property> diff --git a/GUI/coregui/mainwindow/tooltips.xml b/GUI/coregui/mainwindow/tooltips.xml index c9f0ad3e8ca689fee2d1411d25bf9fd9c8ec3804..2b948ab5533b09f880b19484cd44f26a3fde7873 100644 --- a/GUI/coregui/mainwindow/tooltips.xml +++ b/GUI/coregui/mainwindow/tooltips.xml @@ -44,7 +44,7 @@ </category> - <category name="InterferenceFunction1DParaCrystal"> + <category name="InterferenceFunctionRadialParaCrystal"> <property name="Title"> <tooltip>Interference 1D Paracrystal</tooltip> </property> diff --git a/GUI/test_sample_builder.py b/GUI/test_sample_builder.py index 4004737a9f570462c842c18bec565084afa92fab..9a355238f6d233d3f685da42eeaac4bc2c1c1da1 100644 --- a/GUI/test_sample_builder.py +++ b/GUI/test_sample_builder.py @@ -30,7 +30,7 @@ def BuildSample(m_layer_thickness, m_cylinder_height, m_cylinder_radius): middle_layer = Layer(p_layer_material, m_layer_thickness) substrate_layer = Layer(p_substrate_material) - interference_funtion = InterferenceFunction1DParaCrystal(20.0*nanometer, 7*nanometer, 1e7*nanometer) + interference_funtion = InterferenceFunctionRadialParaCrystal(20.0*nanometer, 7*nanometer, 1e7*nanometer) ff_cylinder = FormFactorCylinder(m_cylinder_radius, m_cylinder_height) nano_particle = Particle(n_particle, ff_cylinder ) particle_collection = ParticleDecoration() diff --git a/Tests/FunctionalTests/TestPyCore/isgisaxs04.py b/Tests/FunctionalTests/TestPyCore/isgisaxs04.py index 86f5902d13fe68bd2e697369cc332e89dc35b0ee..7ce68b161c4829fb7d8a8ee811bbe8cf8a0243ae 100644 --- a/Tests/FunctionalTests/TestPyCore/isgisaxs04.py +++ b/Tests/FunctionalTests/TestPyCore/isgisaxs04.py @@ -23,7 +23,7 @@ def RunSimulation1(): # collection of particles cylinder_ff = FormFactorCylinder(5 * nanometer, 5 * nanometer) cylinder = Particle(mParticle, cylinder_ff) - interference = InterferenceFunction1DParaCrystal(20.0 * nanometer, 1e3 * nanometer) + interference = InterferenceFunctionRadialParaCrystal(20.0 * nanometer, 1e3 * nanometer) pdf = FTDistribution1DGauss(7 * nanometer) interference.setProbabilityDistribution(pdf) particle_layout = ParticleLayout() diff --git a/Tests/FunctionalTests/TestPyCore/isgisaxs10.py b/Tests/FunctionalTests/TestPyCore/isgisaxs10.py index 0838148164e60865c06c74a7335120314914bdb8..e3a3bd8fa666a91a670aae8250e57a2a9097c787 100644 --- a/Tests/FunctionalTests/TestPyCore/isgisaxs10.py +++ b/Tests/FunctionalTests/TestPyCore/isgisaxs10.py @@ -22,7 +22,7 @@ def RunSimulation(): # collection of particles cylinder_ff = FormFactorCylinder(5 * nanometer, 5 * nanometer) cylinder = Particle(mParticle, cylinder_ff) - interference = InterferenceFunction1DParaCrystal(20.0 * nanometer, 1e7 * nanometer) + interference = InterferenceFunctionRadialParaCrystal(20.0 * nanometer, 1e7 * nanometer) pdf = FTDistribution1DGauss(7 * nanometer) interference.setProbabilityDistribution(pdf) particle_layout = ParticleLayout() diff --git a/Tests/FunctionalTests/TestPyCore/isgisaxs15.py b/Tests/FunctionalTests/TestPyCore/isgisaxs15.py index 84b4c6d993a2c2e3e0ed2da25ebde4b46ceeee1d..1e4fe591c2a45a9b6b9a69cc83d0dba170538e35 100644 --- a/Tests/FunctionalTests/TestPyCore/isgisaxs15.py +++ b/Tests/FunctionalTests/TestPyCore/isgisaxs15.py @@ -20,7 +20,7 @@ def RunSimulation(): # collection of particles cylinder_ff = FormFactorCylinder(5 * nanometer, 5 * nanometer) - interference = InterferenceFunction1DParaCrystal(15.0 * nanometer, 1e3 * nanometer) + interference = InterferenceFunctionRadialParaCrystal(15.0 * nanometer, 1e3 * nanometer) pdf = FTDistribution1DGauss(5 * nanometer) interference.setProbabilityDistribution(pdf) interference.setKappa(4.02698) diff --git a/Tests/FunctionalTests/TestPyCore/ripple1.py b/Tests/FunctionalTests/TestPyCore/ripple1.py index 9696b85bef6ac9de83b4341a8e5cc0d816bbc6a6..fee8305049d2eaab980f22767977058b88d6ca29 100644 --- a/Tests/FunctionalTests/TestPyCore/ripple1.py +++ b/Tests/FunctionalTests/TestPyCore/ripple1.py @@ -27,7 +27,7 @@ def RunSimulation(): particle_layout = ParticleLayout() particle_layout.addParticle(ripple, 0.0, 1.0) - interference = InterferenceFunction1DParaCrystal(20 * nanometer, 1e7 * nanometer) + interference = InterferenceFunctionRadialParaCrystal(20 * nanometer, 1e7 * nanometer) pdf = FTDistribution1DGauss(4 * nanometer) interference.setProbabilityDistribution(pdf) particle_layout.addInterferenceFunction(interference) diff --git a/Tests/FunctionalTests/TestPyCore/ripple2_asym.py b/Tests/FunctionalTests/TestPyCore/ripple2_asym.py index 26f7fce81d52937752507095bb96cd1f820b5c15..10a846c8830171db6436c8dde91ab366ba754d85 100644 --- a/Tests/FunctionalTests/TestPyCore/ripple2_asym.py +++ b/Tests/FunctionalTests/TestPyCore/ripple2_asym.py @@ -27,7 +27,7 @@ def RunSimulation(): particle_layout = ParticleLayout() particle_layout.addParticle(ripple, 0.0, 1.0) - interference = InterferenceFunction1DParaCrystal(20 * nanometer, 1e7 * nanometer) + interference = InterferenceFunctionRadialParaCrystal(20 * nanometer, 1e7 * nanometer) pdf = FTDistribution1DGauss(4 * nanometer) interference.setProbabilityDistribution(pdf) particle_layout.addInterferenceFunction(interference) diff --git a/Tests/FunctionalTests/TestPyCore/ripple2_sym.py b/Tests/FunctionalTests/TestPyCore/ripple2_sym.py index 5c5570867c541cb9a741e5baaf64bca1f6da925e..52bf7717b88e28ea6d22fcbb5d58ec5ca455c4b1 100644 --- a/Tests/FunctionalTests/TestPyCore/ripple2_sym.py +++ b/Tests/FunctionalTests/TestPyCore/ripple2_sym.py @@ -28,7 +28,7 @@ def RunSimulation(): particle_layout = ParticleLayout() particle_layout.addParticle(ripple, 0.0, 1.0) - interference = InterferenceFunction1DParaCrystal(20 * nanometer, 1e7 * nanometer) + interference = InterferenceFunctionRadialParaCrystal(20 * nanometer, 1e7 * nanometer) pdf = FTDistribution1DGauss(4 * nanometer) interference.setProbabilityDistribution(pdf) particle_layout.addInterferenceFunction(interference) diff --git a/Tests/UnitTests/TestGUI/TestParaCrystalItems.h b/Tests/UnitTests/TestGUI/TestParaCrystalItems.h index dd74ca53439898ca11a96048360857cbf58e8e46..343d2a319877c60e911302b64f10e7734b91b683 100644 --- a/Tests/UnitTests/TestGUI/TestParaCrystalItems.h +++ b/Tests/UnitTests/TestGUI/TestParaCrystalItems.h @@ -16,26 +16,26 @@ private slots: inline void TestParaCrystalItems::test_Para1D_InitialState() { - InterferenceFunction1DParaCrystalItem item; - QCOMPARE(item.modelType(), Constants::InterferenceFunction1DParaCrystalType); - QCOMPARE(item.itemName(), Constants::InterferenceFunction1DParaCrystalType); + InterferenceFunctionRadialParaCrystalItem item; + QCOMPARE(item.modelType(), Constants::InterferenceFunctionRadialParaCrystalType); + QCOMPARE(item.itemName(), Constants::InterferenceFunctionRadialParaCrystalType); QCOMPARE(item.getSubItems().size(), 1); - QCOMPARE(item.getRegisteredProperty(InterferenceFunction1DParaCrystalItem::P_PEAK_DISTANCE).toDouble(), 20.0*Units::nanometer); - QCOMPARE(item.getRegisteredProperty(InterferenceFunction1DParaCrystalItem::P_DAMPING_LENGTH).toDouble(), 1000.0*Units::micrometer); - QCOMPARE(item.getRegisteredProperty(InterferenceFunction1DParaCrystalItem::P_DOMAIN_SIZE).toDouble(), 20.0*Units::micrometer); - QCOMPARE(item.getRegisteredProperty(InterferenceFunction1DParaCrystalItem::P_KAPPA).toDouble(), 0.0); + QCOMPARE(item.getRegisteredProperty(InterferenceFunctionRadialParaCrystalItem::P_PEAK_DISTANCE).toDouble(), 20.0*Units::nanometer); + QCOMPARE(item.getRegisteredProperty(InterferenceFunctionRadialParaCrystalItem::P_DAMPING_LENGTH).toDouble(), 1000.0*Units::micrometer); + QCOMPARE(item.getRegisteredProperty(InterferenceFunctionRadialParaCrystalItem::P_DOMAIN_SIZE).toDouble(), 20.0*Units::micrometer); + QCOMPARE(item.getRegisteredProperty(InterferenceFunctionRadialParaCrystalItem::P_KAPPA).toDouble(), 0.0); - QCOMPARE(item.getSubItems()[InterferenceFunction1DParaCrystalItem::P_PDF]->modelType(), Constants::FTDistribution1DCauchyType); + QCOMPARE(item.getSubItems()[InterferenceFunctionRadialParaCrystalItem::P_PDF]->modelType(), Constants::FTDistribution1DCauchyType); - FancyGroupProperty_t group_property = item.getRegisteredProperty(InterferenceFunction1DParaCrystalItem::P_PDF).value<FancyGroupProperty_t>(); + FancyGroupProperty_t group_property = item.getRegisteredProperty(InterferenceFunctionRadialParaCrystalItem::P_PDF).value<FancyGroupProperty_t>(); QCOMPARE(group_property->type(), FancyGroupProperty::SELECTABLE); } inline void TestParaCrystalItems::test_Para1D_PDFGroupProperty() { - InterferenceFunction1DParaCrystalItem item; + InterferenceFunctionRadialParaCrystalItem item; // check that request for new subItem generates item of correct modelType and // correct signals (one propertyItemChanged, and no propertyChanged) @@ -50,10 +50,10 @@ inline void TestParaCrystalItems::test_Para1D_PDFGroupProperty() foreach(QString pdf_name, pdfs) { QSignalSpy spyItem(&item, SIGNAL(propertyChanged(QString))); QSignalSpy spyPropertyItem(&item, SIGNAL(propertyItemChanged(QString))); - ParameterizedItem *pdfItem = item.setGroupProperty(InterferenceFunction1DParaCrystalItem::P_PDF, pdf_name); + ParameterizedItem *pdfItem = item.setGroupProperty(InterferenceFunctionRadialParaCrystalItem::P_PDF, pdf_name); QVERIFY(pdfItem); QCOMPARE(item.getSubItems().size(), 1); - QCOMPARE(pdfItem, item.getSubItems()[InterferenceFunction1DParaCrystalItem::P_PDF]); + QCOMPARE(pdfItem, item.getSubItems()[InterferenceFunctionRadialParaCrystalItem::P_PDF]); QCOMPARE(spyItem.count(), 0); if(pdf_name == Constants::FTDistribution1DCauchyType) { // default ff @@ -61,7 +61,7 @@ inline void TestParaCrystalItems::test_Para1D_PDFGroupProperty() } else { QCOMPARE(spyPropertyItem.count(), 1); QList<QVariant> arguments = spyPropertyItem.takeFirst(); // take the first signal - QCOMPARE(arguments.at(0).toString(), InterferenceFunction1DParaCrystalItem::P_PDF); + QCOMPARE(arguments.at(0).toString(), InterferenceFunctionRadialParaCrystalItem::P_PDF); } QCOMPARE(pdfItem->modelType(), pdf_name); diff --git a/dev-tools/python-bindings/settings_core.py b/dev-tools/python-bindings/settings_core.py index 7bb03804977ff759b283c4bdbce1a566a2b9d532..c2ef864c91c576226b7d5a4233ef6d2c1cdd4572 100644 --- a/dev-tools/python-bindings/settings_core.py +++ b/dev-tools/python-bindings/settings_core.py @@ -122,7 +122,7 @@ include_classes = [ "Transform3D", "Instrument", "InterferenceFunction1DLattice", - "InterferenceFunction1DParaCrystal", + "InterferenceFunctionRadialParaCrystal", "InterferenceFunction2DLattice", "InterferenceFunction2DParaCrystal", "InterferenceFunctionNone", diff --git a/dev-tools/user-api/docstring.py b/dev-tools/user-api/docstring.py index 169007ce670e0814a6e16af1a4a22884a10c97ea..06ed5e3017659159ca90c12527e302c782b0e5cf 100644 --- a/dev-tools/user-api/docstring.py +++ b/dev-tools/user-api/docstring.py @@ -27,8 +27,8 @@ user_api = [ "FormFactorSphere", "FormFactorSphereGaussianRadius", "IFormFactorBorn.evaluate_for_q", - "InterferenceFunction1DParaCrystal", - "InterferenceFunction1DParaCrystal.setKappa", + "InterferenceFunctionRadialParaCrystal", + "InterferenceFunctionRadialParaCrystal.setKappa", "InterferenceFunction2DLattice", "InterferenceFunction2DParaCrystal", "InterferenceFunction2DParaCrystal.createHexagonal",