From 77efa3fcbea9b5ea771dd5e320e125519ec51f6b Mon Sep 17 00:00:00 2001
From: Juan Manuel Carmona Loaiza <juanmcloaiza@gmail.com>
Date: Mon, 29 Jul 2019 13:16:39 +0200
Subject: [PATCH] Add missing example script SpecularSimulationWithRoughness.py

---
 .../SpecularSimulationWithRoughness.py        | 66 +++++++++++++++++++
 1 file changed, 66 insertions(+)
 create mode 100644 Examples/python/simulation/ex06_Reflectometry/SpecularSimulationWithRoughness.py

diff --git a/Examples/python/simulation/ex06_Reflectometry/SpecularSimulationWithRoughness.py b/Examples/python/simulation/ex06_Reflectometry/SpecularSimulationWithRoughness.py
new file mode 100644
index 00000000000..461545a99b2
--- /dev/null
+++ b/Examples/python/simulation/ex06_Reflectometry/SpecularSimulationWithRoughness.py
@@ -0,0 +1,66 @@
+"""
+Example of simulating a reflectometry experiment
+with a rough sample using BornAgain.
+
+"""
+import bornagain as ba
+from bornagain import deg, angstrom, nm
+
+
+def get_sample():
+    """
+    Defines sample and returns it
+    """
+
+    # creating materials
+    m_ambient = ba.MaterialBySLD("Ambient", 0.0, 0.0)
+    m_ti = ba.MaterialBySLD("Ti", -1.9493e-06, 0.0)
+    m_ni = ba.MaterialBySLD("Ni", 9.4245e-06, 0.0)
+    m_substrate = ba.MaterialBySLD("SiSubstrate", 2.0704e-06, 0.0)
+
+    # creating layers
+    ambient_layer = ba.Layer(m_ambient)
+    ti_layer = ba.Layer(m_ti, 30 * angstrom)
+    ni_layer = ba.Layer(m_ni, 70 * angstrom)
+    substrate_layer = ba.Layer(m_substrate)
+
+    # defining roughness
+    roughness = ba.LayerRoughness()
+    roughness.setSigma(1.0 * nm)
+
+    # creating multilayer
+    multi_layer = ba.MultiLayer()
+    multi_layer.addLayer(ambient_layer)
+    for i in range(10):
+        multi_layer.addLayerWithTopRoughness(ti_layer, roughness)
+        multi_layer.addLayerWithTopRoughness(ni_layer, roughness)
+    multi_layer.addLayerWithTopRoughness(substrate_layer, roughness)
+
+    return multi_layer
+
+
+def get_simulation(scan_size=500):
+    """
+    Defines and returns a specular simulation.
+    """
+    simulation = ba.SpecularSimulation()
+    scan = ba.AngularSpecScan(1.54 * angstrom, scan_size,
+                              0.0 * deg, 2.0 * deg)
+    simulation.setScan(scan)
+    return simulation
+
+
+def run_simulation():
+    """
+    Runs simulation and returns its result.
+    """
+    sample = get_sample()
+    simulation = get_simulation()
+    simulation.setSample(sample)
+    simulation.runSimulation()
+    return simulation.result()
+
+
+if __name__ == '__main__':
+    results = run_simulation()
+    ba.plot_simulation_result(results)
-- 
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