diff --git a/cadetrdm/initialize_repo.py b/cadetrdm/initialize_repo.py
index fd013653664f8b5fa4fe5213a5f393eef0d3148e..927f821c32b3836d88fcba8b3caceea9e2ef083e 100644
--- a/cadetrdm/initialize_repo.py
+++ b/cadetrdm/initialize_repo.py
@@ -114,7 +114,7 @@ def initialize_git(folder="."):
if not proceed:
raise KeyboardInterrupt
except git.exc.InvalidGitRepositoryError:
- os.system(f"git init")
+ os.system(f"git init -b main")
if folder != ":":
os.chdir(starting_directory)
diff --git a/cadetrdm/repositories.py b/cadetrdm/repositories.py
index 67999a9f992c5aefe68f4622fd2dd7bfc10af917..b204ad0fd608595c36f657cd83d1a1dc1f1bef2e 100644
--- a/cadetrdm/repositories.py
+++ b/cadetrdm/repositories.py
@@ -132,10 +132,10 @@ class BaseRepo:
# This folder is a project repo. Use a project repo class to easily access the output repo.
output_repo = ProjectRepo(self.working_dir).output_repo
- if output_repo.active_branch != "master":
+ if output_repo.active_branch != "main":
if output_repo.exist_uncomitted_changes:
output_repo.stash_all_changes()
- output_repo.checkout("master")
+ output_repo.checkout("main")
output_repo.add_list_of_remotes_in_readme_file("project_repo", self.remote_urls)
output_repo.commit("Add remote for project repo")
@@ -340,18 +340,18 @@ class BaseRepo:
def delete_active_branch_if_branch_is_empty(self):
"""
- Delete the currently active branch and checkout the master branch
+ Delete the currently active branch and checkout the main branch
:return:
"""
previous_branch = self.active_branch.name
- if previous_branch == "master":
+ if previous_branch == "main":
return
- commit_of_current_master = str(self._git.rev_parse("master"))
+ commit_of_current_main = str(self._git.rev_parse("main"))
commit_of_current_branch = str(self.head.commit)
- if commit_of_current_branch == commit_of_current_master:
+ if commit_of_current_branch == commit_of_current_main:
print("Removing empty branch", previous_branch)
- self._git.checkout("master")
+ self._git.checkout("main")
self._git.branch("-d", previous_branch)
def add_all_files(self, automatically_add_new_files=True):
@@ -480,14 +480,14 @@ class BaseRepo:
def prepare_new_branch(self, branch_name):
"""
Prepares a new branch to recieve data. This includes:
- - checking out the master branch,
+ - checking out the main branch,
- creating a new branch from there
This thereby produces a clear, empty directory for data, while still maintaining
.gitignore and .gitattributes
:param branch_name:
Name of the new branch.
"""
- self._git.checkout("master")
+ self._git.checkout("main")
self._git.checkout('-b', branch_name) # equivalent to $ git checkout -b %branch_name
code_backup_path = self.working_dir / "run_history"
logs_path = self.working_dir / "log.tsv"
@@ -662,12 +662,12 @@ class ProjectRepo(BaseRepo):
branch_name = "_".join([timestamp, self._output_folder, "from", str(self.active_branch), project_repo_hash[:7]])
return branch_name
- def check_results_master(self):
+ def check_results_main(self):
"""
- Checkout the master branch, which contains all the log files.
+ Checkout the main branch, which contains all the log files.
"""
self._most_recent_branch = self._output_repo.active_branch.name
- self._output_repo._git.checkout("master")
+ self._output_repo._git.checkout("main")
def reload_recent_results(self):
"""
@@ -735,10 +735,10 @@ class ProjectRepo(BaseRepo):
lines=["rdm-log.tsv merge=union"],
open_type="a")
- def update_output_master_logs(self, ):
+ def update_output_main_logs(self, ):
"""
Dumps all the metadata information about the project repositories state and
- the commit hash and branch name of the ouput repository into the master branch of
+ the commit hash and branch name of the ouput repository into the main branch of
the output repository.
"""
output_branch_name = str(self._output_repo.active_branch)
@@ -747,7 +747,7 @@ class ProjectRepo(BaseRepo):
output_commit_message = self._output_repo.active_branch.commit.message
output_commit_message = output_commit_message.replace("\n", "; ")
- self._output_repo._git.checkout("master")
+ self._output_repo._git.checkout("main")
logs_folderpath = self.working_dir / self._output_folder / "run_history" / output_branch_name
if not logs_folderpath.exists():
@@ -958,8 +958,8 @@ class ProjectRepo(BaseRepo):
new_branch_name = self.get_new_output_branch_name()
- # update urls in master branch of output_repo
- output_repo._git.checkout("master")
+ # update urls in main branch of output_repo
+ output_repo._git.checkout("main")
project_repo_remotes = self.remote_urls
output_repo.add_list_of_remotes_in_readme_file("project_repo", project_repo_remotes)
output_repo.commit("Update urls")
@@ -1008,7 +1008,7 @@ class ProjectRepo(BaseRepo):
- Ensure no uncommitted changes in the project repository
- Stage all changes in the output repository
- Commit all changes in the output repository with the given commit message.
- - Update the log files in the master branch of the output repository.
+ - Update the log files in the main branch of the output repository.
:param message:
Commit message for the output repository commit.
"""
@@ -1022,8 +1022,8 @@ class ProjectRepo(BaseRepo):
# This has to be using ._git.commit to raise an error if no results have been written.
commit_return = self.output_repo._git.commit("-m", message)
self.copy_data_to_cache()
- self.update_output_master_logs()
- self.copy_data_to_cache("master")
+ self.update_output_main_logs()
+ self.copy_data_to_cache("main")
print("\n" + commit_return + "\n")
except git.exc.GitCommandError as e:
self.output_repo.delete_active_branch_if_branch_is_empty()
@@ -1067,7 +1067,7 @@ class ProjectRepo(BaseRepo):
class OutputRepo(BaseRepo):
def print_data_log(self):
- self.checkout("master")
+ self.checkout("main")
tsv_filepath = self.working_dir / "log.tsv"